RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 CDHR3Q6ZTQ4 885 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 FAM47EQ6ZV65 393 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 CABS1Q96KC9 395 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 TEKT5Q96M29 485 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 VANGL2Q9ULK5 521 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 MYO1CO00159 1063 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 C2CD2LO14523 706 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 SNX3O60493 162 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 MAFKO60675 156 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 HMBSP08397 361 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 F7P08709 466 aaPredicted RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 HAPLN1P10915 354 aaPredicted RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 TBX4P57082 545 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 CORO7P57737 925 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 DNAJC3Q13217 504 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 CRYMQ14894 314 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 TFAP2DQ7Z6R9 452 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 ZNF683Q8IZ20 524 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 SPATA22Q8NHS9 363 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 FCRL3Q96P31 734 aaPredicted RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 TMEM175Q9BSA9 504 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 BRD8Q9H0E9 1235 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 NOL6Q9H6R4 1146 aaKnown RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 CCSER2Q9H7U1 834 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 SLCO1B3Q9NPD5 702 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
VAPB-203ENST00000463370 WDR91A4D1P6 747 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 ARHGAP42A6NI28 874 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 HOXA2O43364 376 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 CNTN5O94779 1100 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 OAS1P00973 400 aaKnown RBP13.11□□□□□ -0.31
VAPB-203ENST00000463370 NUMBP49757 651 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 IL9RQ01113 521 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 MS4A13Q5J8X5 152 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 ATPAF2Q8N5M1 289 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 MYEOVQ96EZ4 313 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 CWH43Q9H720 699 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
VAPB-203ENST00000463370 SSU72Q9NP77 194 aaKnown RBP13.11□□□□□ -0.31
VAPB-203ENST00000463370 PSAT1Q9Y617 370 aa13.11□□□□□ -0.31
VAPB-203ENST00000463370 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
VAPB-203ENST00000463370 ALDH1A2O94788 518 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 SUN1O94901 812 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 EFEMP2O95967 443 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 CCNB1P14635 433 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 ALFQ53S48 1182 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 C10orf120Q5SQS8 335 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 CERCAMQ5T4B2 595 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 RNF187Q5TA31 235 aaPredicted RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 RTL3Q8N8U3 475 aaKnown RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 SPPL2BQ8TCT7 592 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 SAMD15Q9P1V8 674 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 RFPL1O75677 317 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 TOP3BO95985 862 aaKnown RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 MT-CYBP00156 380 aaPredicted RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 GSTA2P09210 222 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 TPH1P17752 444 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 PGAM1P18669 254 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 ITGB8P26012 769 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 SLC18A2Q05940 514 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 NIPAL4Q0D2K0 466 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 MROH9Q5TGP6 573 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 ANKS3Q6ZW76 656 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 CIR1Q86X95 450 aaPredicted RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 THOC1Q96FV9 657 aaKnown RBP13.1□□□□□ -0.31
VAPB-203ENST00000463370 CATSPERBQ9H7T0 1116 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 GGT7Q9UJ14 662 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 TRHDEQ9UKU6 1024 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 TBX21Q9UL17 535 aa13.1□□□□□ -0.31
VAPB-203ENST00000463370 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 MTSS1O43312 755 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 LPXNO60711 386 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 ZWINTO95229 277 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 SNRPAP09012 282 aaKnown RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 ERVK-10P10266 1014 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 CCNCP24863 283 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 GBP2P32456 591 aaPredicted RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 OR1D2P34982 312 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 ALDH7A1P49419 539 aaKnown RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 PAPOLAP51003 745 aaKnown RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 NEK3P51956 506 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 ELAVL2Q12926 359 aaKnown RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 PDK4Q16654 411 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 HHATQ5VTY9 493 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 MICALCLQ6ZW33 695 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 SPATS2Q86XZ4 545 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms