RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SYNPOQ8N3V7 929 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 FBXL6Q8N531 539 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 KCTD6Q8NC69 237 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 CLDN23Q96B33 292 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 CATSPERBQ9H7T0 1116 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 NDFIP2Q9NV92 336 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 KLHL11Q9NVR0 708 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 DLGAP2Q9P1A6 1054 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 DNAI1Q9UI46 699 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 INTS6Q9UL03 887 aaKnown RBP12.12□□□□□ -0.47
CPNE1-221ENST00000462352 STARD13Q9Y3M8 1113 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 CAPN6Q9Y6Q1 641 aa12.12□□□□□ -0.47
CPNE1-221ENST00000462352 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 KRT1P04264 644 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 ERCC2P18074 760 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 IL4RP24394 825 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 MZF1P28698 734 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 KIR2DL1P43626 348 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 RPS9P46781 194 aaKnown RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 NUMBP49757 651 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 PLK1P53350 603 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 DPYSQ14117 519 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 DPYSL3Q14195 570 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 DMC1Q14565 340 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 EIF4HQ15056 248 aaKnown RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 PDK2Q15119 407 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 EMC10Q5UCC4 262 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 RNF219Q5W0B1 726 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 MBLAC2Q68D91 279 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 Q6ZS52 159 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 MAP7D3Q8IWC1 876 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 APCDD1Q8J025 514 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 RTL3Q8N8U3 475 aaKnown RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 RAPGEF5Q92565 580 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 TSC1Q92574 1164 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 ALG14Q96F25 216 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 CSPG4P5Q96PW8 444 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 C1QTNF1Q9BXJ1 281 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 CIPCQ9C0C6 399 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 MUC3BQ9H195 1237 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 ELOVL2Q9NXB9 296 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 RCOR3Q9P2K3 495 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-221ENST00000462352 HCN2Q9UL51 889 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
CPNE1-221ENST00000462352 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 A0A0D9SEW6 157 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 ILVBLA1L0T0 632 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 PRR33A8MZF0 331 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 ZSCAN12O43309 604 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 TIMM44O43615 452 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 FTCDO95954 541 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-221ENST00000462352 POLR2EP19388 210 aaKnown RBP12.1□□□□□ -0.47
CPNE1-221ENST00000462352 AMPD1P23109 780 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 KDELR1P24390 212 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 CTNNA2P26232 953 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 CTNNA1P35221 906 aaKnown RBP12.1□□□□□ -0.47
CPNE1-221ENST00000462352 TIE1P35590 1138 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 MAGEA9P43362 315 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 MARCKSL1P49006 195 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 GNA12Q03113 381 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 GAS6Q14393 721 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 EGFLAMQ63HQ2 1017 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF783Q6ZMS7 281 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 PEX26Q7Z412 305 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 REXO1L1PQ8IX06 675 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF513Q8N8E2 541 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-221ENST00000462352 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 RPLP0P6Q8NHW5 317 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 USP33Q8TEY7 942 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 UCMAQ8WVF2 138 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 SORCS1Q8WY21 1168 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 KRT35Q92764 455 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 TTC17Q96AE7 1141 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 ZNF670Q9BS34 389 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 FEM1AQ9BSK4 669 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 CALN1Q9BXU9 219 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 CHRDQ9H2X0 955 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 ZDHHC4Q9NPG8 344 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 AMFRQ9UKV5 643 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 OR51B4Q9Y5P0 310 aa12.1□□□□□ -0.47
CPNE1-221ENST00000462352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
CPNE1-221ENST00000462352 CCDC66A2RUB6 948 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 C3orf70A6NLC5 250 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 CHURC1-FNTBB4DL54 471 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 DCLK1O15075 740 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 RAMP2O60895 175 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 ATP5BP06576 529 aaKnown RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms