RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 MUC3AQ02505 3323 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 TCRBV7S2A1N4TA0A589 114 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 BCLAF3A2AJT9 711 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 ZSCAN5CA6NGD5 496 aaPredicted RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 H0Y626 953 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 CNTN5O94779 1100 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 STK10O94804 968 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 SLU7O95391 586 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 GAS8O95995 478 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 RBP3P10745 1247 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 GGCXP38435 758 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 PLK1P53350 603 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 VCPP55072 806 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 EIF3EP60228 445 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 OTUD4Q01804 1114 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 GNA12Q03113 381 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 GBE1Q04446 702 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 SLC20A2Q08357 652 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 ADCY2Q08462 1091 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 DHX34Q14147 1143 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 LLGL1Q15334 1064 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 SLC45A4Q5BKX6 768 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 LY6G5CQ5SRR4 150 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 FYB2Q5VWT5 728 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 PTCRAQ6ISU1 281 aaPredicted RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 TIGD7Q6NT04 549 aaPredicted RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 C1orf228Q6PIY5 440 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 RHBDF2Q6PJF5 856 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 PARM1Q6UWI2 310 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 C4orf22Q6V702 233 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 METTL3Q86U44 580 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 TMEM25Q86YD3 366 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 CDKL3Q8IVW4 592 aaPredicted RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 CFAP52Q8N1V2 620 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 MMGT1Q8N4V1 131 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 RIN3Q8TB24 985 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 TFB1MQ8WVM0 346 aaKnown RBP10.95□□□□□ -0.66
RTF1-202ENST00000462276 HDAC11Q96DB2 347 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 RSPRY1Q96DX4 576 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 VAT1Q99536 393 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 HERPUD2Q9BSE4 406 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 CARD6Q9BX69 1037 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 BBS2Q9BXC9 721 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 AP1M1Q9BXS5 423 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 KLC2Q9H0B6 622 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 PCYOX1Q9UHG3 505 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 FBXO10Q9UK96 956 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 HPCAL4Q9UM19 191 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 ZNF148Q9UQR1 794 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
RTF1-202ENST00000462276 FAM187AA6NFU0 413 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 EFCAB8A8MWE9 144 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 H7C0C1 242 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 TIMM44O43615 452 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 CACNG3O60359 315 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 TSPAN3O60637 253 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 RHOCP08134 193 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 ADH5P11766 374 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 TYRP14679 529 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 GLULP15104 373 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 CCNCP24863 283 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 HOXD9P28356 352 aaPredicted RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 COILP38432 576 aaPredicted RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 EIF2DP41214 584 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 GARSP41250 739 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 ATP5OP48047 213 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 GEMIN4P57678 1058 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 PFKPQ01813 784 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 SULT2A1Q06520 285 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 PPIDQ08752 370 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 SLC10A2Q12908 348 aaPredicted RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 RUNX3Q13761 415 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 OASLQ15646 514 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 ANO4Q32M45 955 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 ITPRIPL2Q3MIP1 535 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 DARS2Q6PI48 645 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 TPGS1Q6ZTW0 290 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 TFAP2DQ7Z6R9 452 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 ADAT2Q7Z6V5 191 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 MFN1Q8IWA4 741 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 ARHGAP12Q8IWW6 846 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 SUGP1Q8IWZ8 645 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 CCDC105Q8IYK2 499 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 NSMCE1Q8WV22 266 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 C1orf54Q8WWF1 131 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 FGF14Q92915 247 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 ACDQ96AP0 544 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 ZNF599Q96NL3 588 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 C2orf49Q9BVC5 232 aaPredicted RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 ECT2Q9H8V3 914 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 RBM12Q9NTZ6 932 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 ETNK2Q9NVF9 386 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 AMACRQ9UHK6 382 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 R3HDM2Q9Y2K5 976 aaKnown RBP10.94□□□□□ -0.66
RTF1-202ENST00000462276 SLC27A6Q9Y2P4 619 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 NUMBLQ9Y6R0 609 aa10.94□□□□□ -0.66
RTF1-202ENST00000462276 NOTCH4Q99466 2003 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms