RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 MED8Q96G25 268 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 FAM84AQ96KN4 292 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF560Q96MR9 790 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 PGLYRP2Q96PD5 576 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 EIF3CQ99613 913 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 THAP9Q9H5L6 903 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 FAM124BQ9H5Z6 455 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 IL21RQ9HBE5 538 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 BATF3Q9NR55 127 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 ITGA11Q9UKX5 1188 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 MYO6Q9UM54 1294 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 AGAP1Q9UPQ3 857 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 CCL26Q9Y258 94 aa6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 USP9YO00507 2555 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-204ENST00000462198 PTPRJQ12913 1337 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ITPR2Q14571 2701 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 NBPF19A0A087WUL8 3843 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ANO9A1A5B4 782 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 KPNA7A9QM74 516 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 KLF8O95600 359 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TRIM49P0CI25 452 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TRIM49CP0CI26 452 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 MYBL2P10244 700 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 GNSP15586 552 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 EPB42P16452 691 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 PAX3P23760 479 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 LRPAP1P30533 357 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 GTF2H1P32780 548 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 AVPR1AP37288 418 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 PIK3CAP42336 1068 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 GCLMP48507 274 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TAF6P49848 677 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 LILRA4P59901 499 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ETF1P62495 437 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 MRPS21P82921 87 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 MYL5Q02045 173 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ENPEPQ07075 957 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 PPP3CAQ08209 521 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 MYO1EQ12965 1108 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 GRIK2Q13002 908 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 SV2CQ496J9 727 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ARHGAP40Q5TG30 622 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF280DQ6N043 979 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TRIM65Q6PJ69 517 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TMCO3Q6UWJ1 677 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 DHRS13Q6UX07 377 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 DSTYKQ6XUX3 929 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF574Q6ZN55 896 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TRAPPC11Q7Z392 1133 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 KIAA0907Q7Z7F0 614 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TMPRSS12Q86WS5 348 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 SLC41A1Q8IVJ1 513 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 SPACA3Q8IXA5 215 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TMEM130Q8N3G9 435 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 CPA6Q8N4T0 437 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ALLCQ8N6M5 410 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 MAB21L3Q8N8X9 362 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TXNDC5Q8NBS9 432 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 CXorf38Q8TB03 319 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 BAHD1Q8TBE0 780 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ENOX1Q8TC92 643 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 PLEKHO2Q8TD55 490 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 USP13Q92995 863 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 PSMG2Q969U7 264 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 HPDLQ96IR7 371 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 PPP1R13BQ96KQ4 1090 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 MED15Q96RN5 788 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 OXCT2Q9BYC2 517 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ZDHHC5Q9C0B5 715 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 CRISPLD1Q9H336 500 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 GAREM1Q9H706 876 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 ST7Q9NRC1 585 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 LATS2Q9NRM7 1088 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TM7SF3Q9NS93 570 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 TDP1Q9NUW8 608 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 DUS2Q9NX74 493 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 UTP6Q9NYH9 597 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 NFE2L3Q9Y4A8 694 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 C2CD3Q4AC94 2353 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 MYOFQ9NZM1 2061 aa6.26□□□□□ -1.41
SMARCC1-204ENST00000462198 BECN2A8MW95 431 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 EFCAB8A8MWE9 144 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 KCNJ18B7U540 433 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 GOLGA6L19H0YKK7 550 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SGK1O00141 431 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 PPEF2O14830 753 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 TNFSF14O43557 240 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 HUS1O60921 280 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 SOAT2O75908 522 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 C4BPAP04003 597 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 OR4Q2P0C623 313 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 ZNF883P0CG24 379 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 EDN3P14138 238 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 PECAM1P16284 738 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 MAOBP27338 520 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 MTIF2P46199 727 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 MXI1P50539 228 aa6.25□□□□□ -1.41
SMARCC1-204ENST00000462198 NAP1L1P55209 391 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms