RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PPP1R9BQ96SB3 815 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 FAM129BQ96TA1 746 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 WDCPQ9H6R7 721 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 ANLNQ9NQW6 1124 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 FANCLQ9NW38 375 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 FBXL12Q9NXK8 326 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 ARHGEF38Q9NXL2 777 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 SLCO1B1Q9Y6L6 691 aa19.52■□□□□ 0.72
VARS-220ENST00000461874 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.51■□□□□ 0.71
VARS-220ENST00000461874 SPAARA0A1B0GVQ0 90 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 MID1O15344 667 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 F9P00740 461 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 TPM2P07951 284 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 MMEP08473 750 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 GGCXP38435 758 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 NNMTP40261 264 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 NUMBP49757 651 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 KLK7P49862 253 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 SULT1E1P49888 294 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 FOXC1Q12948 553 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 ZNF177Q13360 481 aaPredicted RBP19.51■□□□□ 0.71
VARS-220ENST00000461874 SLC25A52Q3SY17 297 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 FAM102AQ5T9C2 384 aaPredicted RBP19.51■□□□□ 0.71
VARS-220ENST00000461874 STK40Q8N2I9 435 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 CPA5Q8WXQ8 436 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 FEM1AQ9BSK4 669 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 TKTL2Q9H0I9 626 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 SIK2Q9H0K1 926 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 OSGEPQ9NPF4 335 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 TMEM51Q9NW97 253 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 SERGEFQ9UGK8 458 aa19.51■□□□□ 0.71
VARS-220ENST00000461874 FAM170AA1A519 330 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 I6L893 689 aaPredicted RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 CLDN11O75508 207 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 FSBPO95073 299 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 CD27P26842 260 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 SLC8A1P32418 973 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 CSNK1EP49674 416 aaKnown RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 VASPP50552 380 aaPredicted RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 AFF3P51826 1226 aaKnown RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 POLR2FP61218 127 aaKnown RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 NOMO3P69849 1222 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 SIM1P81133 766 aaPredicted RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 C2CD6Q53TS8 623 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 FKBP15Q5T1M5 1219 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 IL27RAQ6UWB1 636 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 SND1Q7KZF4 910 aaKnown RBP eCLIP19.5■□□□□ 0.71
VARS-220ENST00000461874 ZNF677Q86XU0 584 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 MSANTD4Q8NCY6 345 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 OR52K2Q8NGK3 314 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 FRS2Q8WU20 508 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 TBCBQ99426 244 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 NEUROG2Q9H2A3 272 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 FAM207AQ9NSI2 230 aaPredicted RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 ANO10Q9NW15 660 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 NOCTQ9UK39 431 aaKnown RBP19.5■□□□□ 0.71
VARS-220ENST00000461874 TBC1D30Q9Y2I9 924 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 PAXBP1Q9Y5B6 917 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 OR51B4Q9Y5P0 310 aa19.5■□□□□ 0.71
VARS-220ENST00000461874 A0A1B0GVT2 93 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 A0A1W2PP55 124 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 EPHB6O15197 1021 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 SH3BP5O60239 455 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 GFPT2O94808 682 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 FLT3P36888 993 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 GALCP54803 685 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 CDH4P55283 916 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 JAM2P57087 298 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 FAM193AP78312 1265 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 DEUP1Q05D60 604 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 HNRNPDQ14103 355 aaKnown RBP19.49■□□□□ 0.71
VARS-220ENST00000461874 ELAVL3Q14576 367 aaKnown RBP19.49■□□□□ 0.71
VARS-220ENST00000461874 NAA35Q5VZE5 725 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 KIAA0895LQ68EN5 471 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 SASS6Q6UVJ0 657 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 ZNF683Q8IZ20 524 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 SLC20A1Q8WUM9 679 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 OMDQ99983 421 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 ORAI3Q9BRQ5 295 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 GAREM1Q9H706 876 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 IL21RQ9HBE5 538 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 TM9SF3Q9HD45 589 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 ADAMTS1Q9UHI8 967 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 TMEM59LQ9UK28 342 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 FZD4Q9ULV1 537 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 SIK3Q9Y2K2 1263 aa19.49■□□□□ 0.71
VARS-220ENST00000461874 GOLGA6L22H0YM25 854 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 GOLGA8SH3BPF8 625 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 RNASEH2AO75792 299 aaKnown RBP19.48■□□□□ 0.71
VARS-220ENST00000461874 CNTN5O94779 1100 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 CER1O95813 267 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 TOP3BO95985 862 aaKnown RBP19.48■□□□□ 0.71
VARS-220ENST00000461874 ADH1BP00325 375 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 IGHV4-34P06331 123 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 ZNF883P0CG24 379 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 VAV1P15498 845 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 GOT1P17174 413 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 C5AR1P21730 350 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 SOX5P35711 763 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 PSMD8P48556 350 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms