RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 TMPRSS4Q9NRS4 437 aa7.81□□□□□ -1.16
ABCA4-202ENST00000460514 KLHL11Q9NVR0 708 aa7.81□□□□□ -1.16
ABCA4-202ENST00000460514 TMEM248Q9NWD8 314 aa7.81□□□□□ -1.16
ABCA4-202ENST00000460514 CWC15Q9P013 229 aaKnown RBP7.81□□□□□ -1.16
ABCA4-202ENST00000460514 SNX12Q9UMY4 172 aa7.81□□□□□ -1.16
ABCA4-202ENST00000460514 SAR1BQ9Y6B6 198 aa7.81□□□□□ -1.16
ABCA4-202ENST00000460514 hCG_1818297A0A087WSY0 165 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 NEDD8-MDP1E9PL57 170 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 PI4K2BG5E9Z4 385 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 FAM72CH0Y354 149 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 I6L893 689 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 GFRA2O00451 464 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 TRDMT1O14717 391 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ZNF500O60304 480 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 CACNG3O60359 315 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 LUC7L3O95232 432 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 PENKP01210 267 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ATP1A1P05023 1023 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 CYP17A1P05093 508 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 PYGMP11217 842 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 SRFP11831 508 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 TYRP14679 529 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 GLULP15104 373 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ARSAP15289 507 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 GOT1P17174 413 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ERCC2P18074 760 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 TGM2P21980 687 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 OR1E1P30953 314 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 EIF2DP41214 584 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 CDKN2BP42772 138 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 MARCKSL1P49006 195 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 NDST2P52849 883 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 VCPP55072 806 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 YBEYP58557 167 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 RPS24P62847 133 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 SLC12A1Q13621 1099 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 TUBB2AQ13885 445 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 DPYSQ14117 519 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 FAM72AQ5TYM5 149 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 PAPD7Q5XG87 772 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 TRIM68Q6AZZ1 485 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 FAM72DQ6L9T8 149 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 RHBDF2Q6PJF5 856 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 MFSD7Q6UXD7 560 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ZNF783Q6ZMS7 281 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 C14orf80Q86SX3 495 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 FAM72BQ86X60 149 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 TMEM25Q86YD3 366 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 LRRC49Q8IUZ0 686 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 MFN1Q8IWA4 741 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 SUGP1Q8IWZ8 645 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ZNF683Q8IZ20 524 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 CFAP52Q8N1V2 620 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 CARNMT1Q8N4J0 409 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 RTL3Q8N8U3 475 aaKnown RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 KIF18AQ8NI77 898 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 RSAD2Q8WXG1 361 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ALG3Q92685 438 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 IGSF8Q969P0 613 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ZFYVE19Q96K21 471 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 PRICKLE1Q96MT3 831 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 WDR24Q96S15 920 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 OSBPL9Q96SU4 736 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 FERMT1Q9BQL6 677 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 TUBB2BQ9BVA1 445 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 OSBPL8Q9BZF1 889 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 ARHGEF4Q9NR80 690 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 SLC2A4RGQ9NR83 387 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 KIAA1522Q9P206 1035 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 RNF14Q9UBS8 474 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 SORCS3Q9UPU3 1222 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 SNX10Q9Y5X0 201 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 RAD54BQ9Y620 910 aa7.8□□□□□ -1.16
ABCA4-202ENST00000460514 KIF26AQ9ULI4 1882 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-202ENST00000460514 GOLGA6L10A0A0M3HER8 536 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 ILVBLA1L0T0 632 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 ARHGAP42A6NI28 874 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 C3orf70A6NLC5 250 aaPredicted RBP7.79□□□□□ -1.16
ABCA4-202ENST00000460514 PGRMC1O00264 195 aaKnown RBP7.79□□□□□ -1.16
ABCA4-202ENST00000460514 NCAM2O15394 837 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 CEP104O60308 925 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 CST8O60676 142 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 RAMP2O60895 175 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 ASGR2P07307 311 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 RHOCP08134 193 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 CD48P09326 243 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 BMP1P13497 986 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 MX2P20592 715 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 AMPD1P23109 780 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 IL4RP24394 825 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 HOXD9P28356 352 aaPredicted RBP7.79□□□□□ -1.16
ABCA4-202ENST00000460514 PAFAH1B1P43034 410 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 NR2C2P49116 596 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 ZNF211Q13398 564 aaPredicted RBP7.79□□□□□ -1.16
ABCA4-202ENST00000460514 DMC1Q14565 340 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 PAFAH1B3Q15102 231 aaKnown RBP7.79□□□□□ -1.16
ABCA4-202ENST00000460514 TAZQ16635 292 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 PARP15Q460N3 678 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 ALFQ53S48 1182 aa7.79□□□□□ -1.16
ABCA4-202ENST00000460514 DNTTIP2Q5QJE6 756 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms