RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 GREB1Q4ZG55 1949 aa13.15□□□□□ -0.3
C4A-244ENST00000460060 hCG_1818297A0A087WSY0 165 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 H3BRJ5 948 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 STC2O76061 302 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 FGGP02679 453 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 IL4RP24394 825 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 AVPR1AP37288 418 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 SLC11A2P49281 568 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 FCHO2Q0JRZ9 810 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 LRRC32Q14392 662 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 DGKKQ5KSL6 1271 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 RFX6Q8HWS3 928 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 YAF2Q8IY57 180 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 MAIP1Q8WWC4 291 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 TSC1Q92574 1164 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
C4A-244ENST00000460060 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 EPAS1Q99814 870 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 HEMGNQ9BXL5 484 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 MAK16Q9BXY0 300 aaKnown RBP13.14□□□□□ -0.31
C4A-244ENST00000460060 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 SLITRK6Q9H5Y7 841 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 SMARCAL1Q9NZC9 954 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 CWC15Q9P013 229 aaKnown RBP13.14□□□□□ -0.31
C4A-244ENST00000460060 OR12D3Q9UGF7 316 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 ARHGAP26Q9UNA1 814 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 EFR3BQ9Y2G0 817 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 SNX10Q9Y5X0 201 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
C4A-244ENST00000460060 MYH10P35580 1976 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 FAM72CH0Y354 149 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 PDE2AO00408 941 aaPredicted RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 EEF2KO00418 725 aaKnown RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 CREB3O43889 395 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 ACSL4O60488 711 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 FOXD2O60548 495 aaPredicted RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 TJP3O95049 919 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 KLKB1P03952 638 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 IRF1P10914 325 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 KRT10P13645 584 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 GOT1P17174 413 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 CORO1AP31146 461 aaKnown RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 HOXA6P31267 233 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 HTR7P34969 479 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 SOX9P48436 509 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 HCAR3P49019 387 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 NRG1Q02297 640 aaPredicted RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 MMRN1Q13201 1228 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 TFDP2Q14188 446 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 LLGL1Q15334 1064 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 ANKRD20A8PQ5CZ79 823 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 FAM72AQ5TYM5 149 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 KAZNQ674X7 775 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 HEATR6Q6AI08 1181 aaKnown RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 FAM72DQ6L9T8 149 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 TXNDC11Q6PKC3 985 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 LRRC31Q6UY01 552 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 FAM72BQ86X60 149 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 DDX42Q86XP3 938 aaKnown RBP eCLIP13.13□□□□□ -0.31
C4A-244ENST00000460060 CEP112Q8N8E3 955 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 FAF2Q96CS3 445 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 CSPG4P5Q96PW8 444 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 DDX50Q9BQ39 737 aaKnown RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 HERPUD2Q9BSE4 406 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 SMG9Q9H0W8 520 aaKnown RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 PRDM16Q9HAZ2 1276 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 C2orf42Q9NWW7 574 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 STIM2Q9P246 746 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 CFAP97Q9P2B7 532 aa13.13□□□□□ -0.31
C4A-244ENST00000460060 XPO7Q9UIA9 1087 aaKnown RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 LSM7Q9UK45 103 aaKnown RBP13.13□□□□□ -0.31
C4A-244ENST00000460060 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 LEFTY2O00292 366 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 DAPK3O43293 454 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 LRIG2O94898 1065 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 LATS1O95835 1130 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 ZFXP17010 805 aaPredicted RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 WEE1P30291 646 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 CTHP32929 405 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 TPI1P60174 286 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 ZXDBP98169 803 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 PIK3R6Q5UE93 754 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 Q6ZS52 159 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 BBS12Q6ZW61 710 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 HTR3DQ70Z44 454 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 ADAT2Q7Z6V5 191 aaKnown RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 C14orf80Q86SX3 495 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 WDR5BQ86VZ2 330 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 DENND1CQ8IV53 801 aa13.12□□□□□ -0.31
C4A-244ENST00000460060 ARID3BQ8IVW6 561 aaPredicted RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 FAM160A2Q8N612 972 aaPredicted RBP13.12□□□□□ -0.31
C4A-244ENST00000460060 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms