RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ADAMTS5Q9UNA0 930 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 SSC5DA1L4H1 1573 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 A0A087X0T9 212 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 FAM228BP0C875 321 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 CASP4P49662 377 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 ACLYP53396 1101 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 GEMP55040 296 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 TNFAIP8L3Q5GJ75 292 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 SWSAP1Q6NVH7 229 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PMF1Q6P1K2 205 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 SYTL1Q8IYJ3 562 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 ATPAF2Q8N5M1 289 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 ATG16L2Q8NAA4 619 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 TFB1MQ8WVM0 346 aaKnown RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 ZNF669Q96BR6 464 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 MCEEQ96PE7 176 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 GCNAQ96QF7 691 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 XPNPEP3Q9NQH7 507 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 LMCD1Q9NZU5 365 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 GABBR1Q9UBS5 961 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PFDN2Q9UHV9 154 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 AAR2Q9Y312 384 aaKnown RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 GPC6Q9Y625 555 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 UBE2QL1A1L167 161 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PPP1R11O60927 126 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 IL18RAPO95256 599 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 CDC42EP1Q00587 391 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 CREG2Q8IUH2 290 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 STARD8Q92502 1023 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 CENPIQ92674 756 aaPredicted RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 ZFP42Q96MM3 310 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 PPP1R10Q96QC0 940 aaKnown RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 SEMA4AQ9H3S1 761 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 EHD1Q9H4M9 534 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 MRPL39Q9NYK5 338 aaKnown RBP9.95□□□□□ -0.82
UFD1-205ENST00000459854 NDUFAF1Q9Y375 327 aa9.95□□□□□ -0.82
UFD1-205ENST00000459854 MYMKA6NI61 221 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 FAM220BPB1ANY3 271 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 RECQL5O94762 991 aaPredicted RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 LSM8O95777 96 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 PRKAR1AP10644 381 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 SP100P23497 879 aaPredicted RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 PTPAQ15257 358 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 CYP51A1Q16850 503 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 ZFP69Q49AA0 526 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 ZNF394Q53GI3 561 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 PRCCQ92733 491 aaPredicted RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 ATXN7L3BQ96GX2 97 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 CATSPERBQ9H7T0 1116 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 IL1RL2Q9HB29 575 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 SYTL2Q9HCH5 934 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 SARS2Q9NP81 518 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 EHD3Q9NZN3 535 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 EMC3Q9P0I2 261 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 ANAPC2Q9UJX6 822 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 EFR3BQ9Y2G0 817 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 ACOT9Q9Y305 439 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 F8W810 466 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 TRIM38O00635 465 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 PABPC1P11940 636 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 MLNP12872 115 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 LRPAP1P30533 357 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 PRIM2P49643 509 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 HPCAP84074 193 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 FRG1Q14331 258 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 TTLL9Q3SXZ7 439 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 INO80DQ53TQ3 878 aaPredicted RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 MRNIPQ6NTE8 343 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 ZCCHC9Q8N567 271 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 LXNQ9BS40 222 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 C17orf75Q9HAS0 396 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 AASDHPPTQ9NRN7 309 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 C3orf18Q9UK00 162 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 KIAA1257Q9ULG3 409 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 DUSP12Q9UNI6 340 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 PRELID1Q9Y255 219 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 CCDC154A6NI56 674 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 TMEM114B3SHH9 223 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 MRASO14807 208 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 MGRN1O60291 552 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 PROSCO94903 275 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 S100A6P06703 90 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 SLC26A2P50443 739 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 NCALDP61601 193 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 FOLH1Q04609 750 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 POLD3Q15054 466 aaPredicted RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 TTI2Q6NXR4 508 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 ZNF605Q86T29 641 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 PLK2Q9NYY3 685 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 ZNF536O15090 1300 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 EEF2KO00418 725 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 CABYRO75952 493 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 DDHD2O94830 711 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 MYL12AP19105 171 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 CRABP2P29373 138 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 USP39Q53GS9 565 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 RP9Q8TA86 221 aaKnown RBP9.94□□□□□ -0.82
UFD1-205ENST00000459854 TCP10LQ8TDR4 215 aa9.94□□□□□ -0.82
UFD1-205ENST00000459854 SGF29Q96ES7 293 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms