RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TMPRSS7Q7RTY8 843 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 ADAT2Q7Z6V5 191 aaKnown RBP16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 GLRX5Q86SX6 157 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 CIR1Q86X95 450 aaPredicted RBP16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 IRF2BP1Q8IU81 584 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 RHBDD1Q8TEB9 315 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 LMLNQ96KR4 655 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 NUP62CLQ9H1M0 184 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 RSPH9Q9H1X1 276 aaPredicted RBP16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 SGK2Q9HBY8 427 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 FBXL12Q9NXK8 326 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 INTS6Q9UL03 887 aaKnown RBP16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 PCDHGC3Q9UN70 934 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 SLCO1B1Q9Y6L6 691 aa16.26■□□□□ 0.19
CHCHD3-204ENST00000457942 EDDM13A0A1B0GTR0 161 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 A0A1B0GVT2 93 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 TTC34A8MYJ7 566 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 IGLV3-25P01717 112 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 GLI1P08151 1106 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 SRPRAP08240 638 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 PDGFRAP16234 1089 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 ABCG1P45844 678 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 PSMD8P48556 350 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 CSNK1EP49674 416 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 AFF3P51826 1226 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 CLDN6P56747 220 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 ECT2LQ008S8 904 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 HLA-BQ31612 363 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 VWA3BQ502W6 1294 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 TTC39BQ5VTQ0 682 aaPredicted RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 SLC47A2Q86VL8 602 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 MMAAQ8IVH4 418 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 APCDD1Q8J025 514 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 CCAR2Q8N163 923 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 BAHD1Q8TBE0 780 aaPredicted RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 MYO19Q96H55 970 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 RPL10LQ96L21 214 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 RPRD1AQ96P16 312 aaPredicted RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 OMDQ99983 421 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 TUBGCP2Q9BSJ2 902 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 PABPC3Q9H361 631 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 NDST4Q9H3R1 872 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 PLCB1Q9NQ66 1216 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 ASNSD1Q9NWL6 643 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 SCML1Q9UN30 329 aa16.25■□□□□ 0.19
CHCHD3-204ENST00000457942 A0A1B0GVM2 712 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 TCAF2A6NFQ2 919 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 FOXN3O00409 490 aaPredicted RBP16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 MID1O15344 667 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 DAB1O75553 588 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 RNASEH2AO75792 299 aaKnown RBP16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 ERBB2P04626 1255 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 BPIFB4P59827 614 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 IL9RQ01113 521 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 CST6Q15828 149 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 WDTC1Q8N5D0 677 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 BIRC7Q96CA5 298 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 MRGPRX3Q96LB0 322 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 SLC2A13Q96QE2 648 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 SIX2Q9NPC8 291 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 TMEM131Q92545 1883 aa16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 TP53BP1Q12888 1972 aaPredicted RBP16.24■□□□□ 0.19
CHCHD3-204ENST00000457942 A0A1W2PP55 124 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 FAM170AA1A519 330 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 TARSL2A2RTX5 802 aaKnown RBP16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 M0QYT0 321 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 KCNK3O14649 394 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 FLRT2O43155 660 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 C1QL1O75973 258 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 CD27P26842 260 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 ITPKBP27987 946 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 ERCC5P28715 1186 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 STK19P49842 368 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 RNASE9P60153 205 aaKnown RBP16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 SLC6A3Q01959 620 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 CENPCQ03188 943 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 C19orf57Q0VDD7 668 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 SLC12A1Q13621 1099 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 PTPN20Q4JDL3 420 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 OLFML1Q6UWY5 402 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 DHRS13Q6UX07 377 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 USP30Q70CQ3 517 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 KDM1BQ8NB78 822 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 TM9SF3Q9HD45 589 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 SLCO3A1Q9UIG8 710 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 SLC25A13Q9UJS0 675 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 VANGL2Q9ULK5 521 aa16.23■□□□□ 0.19
CHCHD3-204ENST00000457942 PLXNA2O75051 1894 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 CFAP46Q8IYW2 2715 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 LRRC72A6NJI9 287 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 IL1BP01584 269 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 CLCN1P35523 988 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 GGCXP38435 758 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 SULT1E1P49888 294 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 OXCT1P55809 520 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 SULT2A1Q06520 285 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 MTA1Q13330 715 aa16.22■□□□□ 0.19
CHCHD3-204ENST00000457942 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms