RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 MSH3P20585 1137 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 SERPINH1P50454 418 aaKnown RBP11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 ZNF135P52742 658 aaPredicted RBP11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 ALDH6A1Q02252 535 aaKnown RBP11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 BCL2L1Q07817 233 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 HSDL1Q3SXM5 330 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 PHF13Q86YI8 300 aaPredicted RBP11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 ATG16L2Q8NAA4 619 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 TADA1Q96BN2 335 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 CDRT15Q96T59 188 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 RERGLQ9H628 205 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
SMARCAD1-204ENST00000457823 MEI4A8MW99 385 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 MRASO14807 208 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 KIF1CO43896 1103 aaKnown RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 PARNO95453 639 aaKnown RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 ATP6V1G2O95670 118 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 GSTM1P09488 218 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 DRG2P55039 364 aaKnown RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 CACUL1Q86Y37 369 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 NSMCE2Q96MF7 247 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 IL22Q9GZX6 179 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 USE1Q9NZ43 259 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 REXO2Q9Y3B8 237 aaKnown RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 C2CD2Q9Y426 696 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 CHADO15335 359 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 PROCP04070 461 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 RAD23AP54725 363 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 TAS2R40P59535 323 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 PLEKHM3Q6ZWE6 761 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 NECAB2Q7Z6G3 386 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 MCOLN3Q8TDD5 553 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 LPPQ93052 612 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 MED8Q96G25 268 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 BBS2Q9BXC9 721 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 MYLK2Q9H1R3 596 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 TMEM245Q9H330 911 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 MIEF1Q9NQG6 463 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 ZMYM5Q9UJ78 669 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 VAV3Q9UKW4 847 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 FSCN2O14926 492 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 SEC22BO75396 215 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 NUP107P57740 925 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 RTP1P59025 263 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 OASLQ15646 514 aaKnown RBP11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 DUPD1Q68J44 220 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 TPGS1Q6ZTW0 290 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 MILR1Q7Z6M3 343 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 PALB2Q86YC2 1186 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 SPACA6W5XKT8 324 aa11.94□□□□□ -0.5
SMARCAD1-204ENST00000457823 IFRD1O00458 451 aaPredicted RBP11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 RGS5O15539 181 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 SH3BGRLO75368 114 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 CLPTM1O96005 669 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ERCC2P18074 760 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ARF4P18085 180 aaPredicted RBP11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 RRM2P31350 389 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ANXA11P50995 505 aaKnown RBP11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ARMC12Q5T9G4 340 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 RAP1GAP2Q684P5 730 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 LLGL2Q6P1M3 1020 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 TRIM69Q86WT6 500 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 KIAA2013Q8IYS2 634 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 CKAP2Q8WWK9 683 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 LGMNQ99538 433 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 KCTD14Q9BQ13 255 aaPredicted RBP11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ROGDIQ9GZN7 287 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 TRPC4Q9UBN4 977 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 RIPK3Q9Y572 518 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ADGRB2O60241 1585 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 BANF1O75531 89 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 HOXC6P09630 235 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 GOT1P17174 413 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 NFKB1P19838 968 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ME2P23368 584 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 FASP25445 335 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ALDH9A1P49189 494 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 PRKAA2P54646 552 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 MTA1Q13330 715 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 PLD1Q13393 1074 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 SPDYCQ5MJ68 293 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 HYIQ5T013 277 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 HOMEZQ8IX15 550 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ALLCQ8N6M5 410 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 OR56A4Q8NGH8 313 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 PRCCQ92733 491 aaPredicted RBP11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 DPP7Q9UHL4 492 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 AP4S1Q9Y587 144 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 BTNL10A8MVZ5 291 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 TPP1O14773 563 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 SNX3O60493 162 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 CCNE2O96020 404 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 ALADP13716 330 aa11.93□□□□□ -0.5
SMARCAD1-204ENST00000457823 CCT8P50990 548 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms