RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CPA5Q8WXQ8 436 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 IGSF8Q969P0 613 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 C1orf74Q96LT6 269 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 GTPBP2Q9BX10 602 aaKnown RBP18.4■□□□□ 0.54
MSH6-207ENST00000456246 PABPC3Q9H361 631 aaKnown RBP18.4■□□□□ 0.54
MSH6-207ENST00000456246 SLC32A1Q9H598 525 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 TMEM59LQ9UK28 342 aa18.4■□□□□ 0.54
MSH6-207ENST00000456246 GOLGA8SH3BPF8 625 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 EPHB6O15197 1021 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 CCDC172P0C7W6 258 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 FLT3P36888 993 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 FMO1Q01740 532 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 CENPCQ03188 943 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 ELAVL3Q14576 367 aaKnown RBP18.39■□□□□ 0.53
MSH6-207ENST00000456246 NCAPHQ15003 741 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 C9orf64Q5T6V5 341 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 CIR1Q86X95 450 aaPredicted RBP18.39■□□□□ 0.53
MSH6-207ENST00000456246 DHX40Q8IX18 779 aaKnown RBP18.39■□□□□ 0.53
MSH6-207ENST00000456246 MINDY1Q8N5J2 469 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 SLC20A1Q8WUM9 679 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 TBCBQ99426 244 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 BPIFA3Q9BQP9 254 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 SIK2Q9H0K1 926 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 MIR1-1HGQ9H1L0 117 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 DNAAF2Q9NVR5 837 aaKnown RBP18.39■□□□□ 0.53
MSH6-207ENST00000456246 SLC25A13Q9UJS0 675 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 TPX2Q9ULW0 747 aaKnown RBP18.39■□□□□ 0.53
MSH6-207ENST00000456246 TBC1D30Q9Y2I9 924 aa18.39■□□□□ 0.53
MSH6-207ENST00000456246 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 BCAT2O15382 392 aaPredicted RBP18.38■□□□□ 0.53
MSH6-207ENST00000456246 ADCY5O95622 1261 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 ADH1BP00325 375 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 MZF1P28698 734 aaPredicted RBP18.38■□□□□ 0.53
MSH6-207ENST00000456246 ACSL1P33121 698 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 CTSOP43234 321 aaPredicted RBP18.38■□□□□ 0.53
MSH6-207ENST00000456246 SEMA3BQ13214 749 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 SLC14A1Q13336 389 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 CST6Q15828 149 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 N4BP2L1Q5TBK1 243 aaPredicted RBP18.38■□□□□ 0.53
MSH6-207ENST00000456246 SH3PXD2AQ5TCZ1 1133 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 IL27RAQ6UWB1 636 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 BNIPLQ7Z465 357 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 DSG4Q86SJ6 1040 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 ZCCHC9Q8N567 271 aaKnown RBP18.38■□□□□ 0.53
MSH6-207ENST00000456246 AOPEPQ8N6M6 819 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 HAPLN3Q96S86 360 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 FEM1AQ9BSK4 669 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 OSGEPQ9NPF4 335 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 FBXL12Q9NXK8 326 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 TMEM63CQ9P1W3 806 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 SLCO3A1Q9UIG8 710 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 VPS28Q9UK41 221 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 FZD4Q9ULV1 537 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.38■□□□□ 0.53
MSH6-207ENST00000456246 ACACBO00763 2458 aa18.38■□□□□ 0.53
MSH6-207ENST00000456246 NUMA1Q14980 2115 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 SMTNL1A8MU46 457 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 TFE3P19532 575 aaPredicted RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 MAOBP27338 520 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 NSFP46459 744 aaKnown RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 GSCP56915 257 aaPredicted RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 KRT83P78385 493 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 HNRNPDQ14103 355 aaKnown RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 C2CD6Q53TS8 623 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 SETD3Q86TU7 594 aaPredicted RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 GANCQ8TET4 914 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 ALG14Q96F25 216 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 RPL10LQ96L21 214 aaKnown RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 C2orf49Q9BVC5 232 aaPredicted RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 ADAM33Q9BZ11 813 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 MTG2Q9H4K7 406 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 METTL5Q9NRN9 209 aaKnown RBP18.37■□□□□ 0.53
MSH6-207ENST00000456246 ADAMTS1Q9UHI8 967 aa18.37■□□□□ 0.53
MSH6-207ENST00000456246 IGLV3-10A0A075B6K4 115 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 DRGXA6NNA5 263 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 ALOX15BO15296 676 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 ATP9BO43861 1147 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 ENDOD1O94919 500 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 CALB1P05937 261 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 RHOCP08134 193 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 UNGP13051 313 aaPredicted RBP18.36■□□□□ 0.53
MSH6-207ENST00000456246 CHRNB2P17787 502 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 C5AR1P21730 350 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 PMLP29590 882 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 SDC4P31431 198 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 SLC8A1P32418 973 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 GGCXP38435 758 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 AFF3P51826 1226 aaKnown RBP18.36■□□□□ 0.53
MSH6-207ENST00000456246 SHC2P98077 582 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 GRIK2Q13002 908 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 TEAD4Q15561 434 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 ARL13BQ3SXY8 428 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 C6orf118Q5T5N4 469 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 APTXQ7Z2E3 356 aaKnown RBP18.36■□□□□ 0.53
MSH6-207ENST00000456246 C14orf80Q86SX3 495 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 MMAAQ8IVH4 418 aaKnown RBP18.36■□□□□ 0.53
MSH6-207ENST00000456246 ZNF683Q8IZ20 524 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 SNX19Q92543 992 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 PTPRN2Q92932 1015 aa18.36■□□□□ 0.53
MSH6-207ENST00000456246 CFAP57Q96MR6 1250 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms