RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 XPO6Q96QU8 1125 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 GTPBP2Q9BX10 602 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 DUSP16Q9BY84 665 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 IMPG2Q9BZV3 1241 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 CYP3A43Q9HB55 503 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEM9BQ9NQ34 198 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 CISHQ9NSE2 258 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 CACNA2D2Q9NY47 1150 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 CALCOCO1Q9P1Z2 691 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 USP25Q9UHP3 1055 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 RASAL2Q9UJF2 1139 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PILRBQ9UKJ0 227 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 ANGPTL2Q9UKU9 493 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 PCDHB14Q9Y5E9 798 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 FRYLO94915 3013 aa4.92□□□□□ -1.62
GTF3C3-208ENST00000455546 WDR87Q6ZQQ6 2873 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 IGHV1OR15-9A0A0B4J2B8 117 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM237AA0A1B0GTK4 181 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 SLC12A8A0AV02 714 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TRIM49BA6NDI0 452 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 MAPK13O15264 365 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TMPRSS2O15393 492 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CACNG3O60359 315 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TSPAN3O60637 253 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CFIP05156 583 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 MYL1P05976 194 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 RALAP11233 206 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 DRD2P14416 443 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 ENGP17813 658 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 RPL13P26373 211 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 COL8A1P27658 744 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TKTL1P51854 596 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM193AP78312 1265 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 ZNF33AQ06730 810 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 INCA1Q0VD86 236 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 NFIL3Q16649 462 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 GEN1Q17RS7 908 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 HSF5Q4G112 596 aaPredicted RBP4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CBWD6Q4V339 395 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 ZCWPW2Q504Y3 356 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 PRRT3Q5FWE3 981 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CBWD3Q5JTY5 395 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CBWD5Q5RIA9 395 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TCERG1LQ5VWI1 586 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 FYB2Q5VWT5 728 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 LYSMD4Q5XG99 296 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 KRT39Q6A163 491 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 ANKRD40Q6AI12 368 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 SDE2Q6IQ49 451 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CCDC186Q7Z3E2 898 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 C11orf74Q86VG3 221 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 SLITRK4Q8IW52 837 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 GUF1Q8N442 669 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TRIML1Q8N9V2 468 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CCDC150Q8NCX0 1101 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 FBXL13Q8NEE6 735 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 SORCS1Q8WY21 1168 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CCDC47Q96A33 483 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEM176AQ96HP8 235 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 SEC16BQ96JE7 1060 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 MRGPRX1Q96LB2 322 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CAMK1GQ96NX5 476 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 FERD3LQ96RJ6 166 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 NUSAP1Q9BXS6 441 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 TMEM8AQ9HCN3 771 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 CD248Q9HCU0 757 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 RAB20Q9NX57 234 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 WDR35Q9P2L0 1181 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 SFMBT1Q9UHJ3 866 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 LSM7Q9UK45 103 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 FBXO10Q9UK96 956 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 AGO1Q9UL18 857 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 PCDHA5Q9Y5H7 936 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 STON1Q9Y6Q2 735 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 PTPRBP23467 1997 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 PCDH15Q96QU1 1955 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 ASXL3Q9C0F0 2248 aa4.91□□□□□ -1.62
GTF3C3-208ENST00000455546 GOLGA6L7A0A1B0GV03 622 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 SPAARA0A1B0GVQ0 90 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 A0A1W2PQ27 194 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 A0A1W2PQ64 194 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 A0A1W2PQD8 194 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 KCNJ18B7U540 433 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 RNF225M0QZC1 329 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 CETN3O15182 167 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 AP5Z1O43299 807 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 HYAL3O43820 417 aaPredicted RBP4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 NDUFS2O75306 463 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 STK10O94804 968 aaKnown RBP4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 EPB41P11171 864 aaKnown RBP4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 CEACAM1P13688 526 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 HLA-EP13747 358 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 LCP1P13796 627 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 CD19P15391 556 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 TRIM21P19474 475 aaKnown RBP4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 CORO1AP31146 461 aaKnown RBP4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 GTF2H1P32780 548 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 ETFBP38117 255 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 IL12RB1P42701 662 aa4.9□□□□□ -1.63
GTF3C3-208ENST00000455546 RGS7P49802 495 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms