RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 P3H4Q92791 437 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 BHMTQ93088 406 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 OLFM3Q96PB7 478 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 FRMD8P1Q9BZ68 369 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 SAE1Q9UBE0 346 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 FBXO10Q9UK96 956 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 R3HDM2Q9Y2K5 976 aaKnown RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 MYO10Q9HD67 2058 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 ILVBLA1L0T0 632 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 CACNG3O60359 315 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 OTUD4Q01804 1114 aaKnown RBP17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 ZP2Q05996 745 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 CKAP4Q07065 602 aaKnown RBP17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 NOMO1Q15155 1222 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 ANO4Q32M45 955 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 C1orf228Q6PIY5 440 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 ZNF783Q6ZMS7 281 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 BZW1Q7L1Q6 419 aaKnown RBP17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 MFN1Q8IWA4 741 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 ETFBKMTQ8IXQ9 262 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 SLC44A3Q8N4M1 653 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 PRELID2Q8N945 189 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 ZNF557Q8N988 423 aaPredicted RBP17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 OR52K2Q8NGK3 314 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 FIBINQ8TAL6 211 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 ACTL9Q8TC94 416 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 WFDC5Q8TCV5 224 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 LMLNQ96KR4 655 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 SLC2A11Q9BYW1 496 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 TRPV5Q9NQA5 729 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 RRAGDQ9NQL2 400 aaPredicted RBP17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 CLEC4EQ9ULY5 219 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 HEY1Q9Y5J3 304 aa17.02■□□□□ 0.32
CCDC90B-202ENST00000455220 COL4A2P08572 1712 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 H0Y626 953 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 RAMP2O60895 175 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 RHOCP08134 193 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 YBEYP58557 167 aaPredicted RBP17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 GALNT2Q10471 571 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 NR1H3Q13133 447 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 CDH18Q13634 790 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 CYP1B1Q16678 543 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 PARP15Q460N3 678 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 FSCBQ5H9T9 825 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 TP53INP2Q8IXH6 220 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 CARNMT1Q8N4J0 409 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 C12orf50Q8NA57 414 aaPredicted RBP17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 SLC35B2Q8TB61 432 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 HAUS1Q96CS2 278 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 CELF6Q96J87 481 aaKnown RBP17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 AP1M1Q9BXS5 423 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 BRD9Q9H8M2 597 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 HOMER3Q9NSC5 361 aa17.02■□□□□ 0.31
CCDC90B-202ENST00000455220 GOLGA6L10A0A0M3HER8 536 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 KRIT1O00522 736 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 NCAM2O15394 837 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 OXCT1P55809 520 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 GNA12Q03113 381 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 CCNG2Q16589 344 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 ITPRIPL2Q3MIP1 535 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 DRICH1Q6PGQ1 229 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 CCDC117Q8IWD4 279 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 ATXN2LQ8WWM7 1075 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 SLC39A8Q9C0K1 460 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 MAGEH1Q9H213 219 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 GTSE1Q9NYZ3 720 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 OR51B4Q9Y5P0 310 aa17.01■□□□□ 0.31
CCDC90B-202ENST00000455220 RASA4BC9J798 803 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 RASA4O43374 803 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 LIASO43766 372 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 MAP3K6O95382 1288 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 ASGR2P07307 311 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 MX2P20592 715 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 GJA4P35212 333 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 XRCC4Q13426 336 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 POLD3Q15054 466 aaPredicted RBP17■□□□□ 0.31
CCDC90B-202ENST00000455220 PDK1Q15118 436 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 C12orf40Q86WS4 652 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 LRRC49Q8IUZ0 686 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 DDX51Q8N8A6 666 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC90B-202ENST00000455220 NETO2Q8NC67 525 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 SPATA4Q8NEY3 305 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 ATG4AQ8WYN0 398 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 DNASE1L2Q92874 299 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 ARHGEF2Q92974 986 aaKnown RBP17■□□□□ 0.31
CCDC90B-202ENST00000455220 NKD2Q969F2 451 aaPredicted RBP17■□□□□ 0.31
CCDC90B-202ENST00000455220 HDAC11Q96DB2 347 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 ALG14Q96F25 216 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
CCDC90B-202ENST00000455220 FAM118BQ9BPY3 351 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 KIAA1522Q9P206 1035 aaPredicted RBP17■□□□□ 0.31
CCDC90B-202ENST00000455220 NYNRINQ9P2P1 1898 aaKnown RBP17■□□□□ 0.31
CCDC90B-202ENST00000455220 TICRRQ7Z2Z1 1910 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 KIAA1549LQ6ZVL6 1849 aa17■□□□□ 0.31
CCDC90B-202ENST00000455220 A0A0D9SEW6 157 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 C19orf67A6NJJ6 358 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 CCDC188H7C350 402 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 MCF2LO15068 1137 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 CISD3P0C7P0 127 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 HLA-FP30511 346 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms