RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 E2F5Q15329 346 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 LPAL2Q16609 132 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 C5orf22Q49AR2 442 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 CEP68Q76N32 757 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 STRADAQ7RTN6 431 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 CCDC117Q8IWD4 279 aaPredicted RBP15.1■□□□□ 0.01
VPS16-205ENST00000453689 ZNF683Q8IZ20 524 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 SLC35G2Q8TBE7 412 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 CYB5D2Q8WUJ1 264 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 HMGB4Q8WW32 186 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 CENPIQ92674 756 aaPredicted RBP15.1■□□□□ 0.01
VPS16-205ENST00000453689 ERLEC1Q96DZ1 483 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 LCMT1Q9UIC8 334 aa15.1■□□□□ 0.01
VPS16-205ENST00000453689 INTS6Q9UL03 887 aaKnown RBP15.1■□□□□ 0.01
VPS16-205ENST00000453689 SDK1Q7Z5N4 2213 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 RCCD1A6NED2 376 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 BTNL10A8MVZ5 291 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 CCP110O43303 1012 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 CCDC175P0C221 793 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
VPS16-205ENST00000453689 PRKCHP24723 683 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 PSMA2P25787 234 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 HDAC4P56524 1084 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 ZNF252P-AS1Q0IIN9 211 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 KIF5AQ12840 1032 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 CXorf57Q6NSI4 855 aaKnown RBP15.09■□□□□ 0.01
VPS16-205ENST00000453689 SERPINA13PQ6UXR4 307 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 PGBD3Q8N328 593 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 FAM172AQ8WUF8 416 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 TTC17Q96AE7 1141 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 C1orf74Q96LT6 269 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 HAPLN3Q96S86 360 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 OSGEPQ9NPF4 335 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 KIAA1522Q9P206 1035 aaPredicted RBP15.09■□□□□ 0.01
VPS16-205ENST00000453689 BCCIPQ9P287 314 aaKnown RBP eCLIP15.09■□□□□ 0.01
VPS16-205ENST00000453689 RAB23Q9ULC3 237 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 TFR2Q9UP52 801 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 INVSQ9Y283 1065 aa15.09■□□□□ 0.01
VPS16-205ENST00000453689 OTOGLQ3ZCN5 2332 aa15.08■□□□□ 0
VPS16-205ENST00000453689 MYO1FO00160 1098 aa15.08■□□□□ 0
VPS16-205ENST00000453689 DCLK1O15075 740 aa15.08■□□□□ 0
VPS16-205ENST00000453689 CNTN5O94779 1100 aa15.08■□□□□ 0
VPS16-205ENST00000453689 ATP5BP06576 529 aaKnown RBP15.08■□□□□ 0
VPS16-205ENST00000453689 DLDP09622 509 aaKnown RBP15.08■□□□□ 0
VPS16-205ENST00000453689 NDUFV2P19404 249 aa15.08■□□□□ 0
VPS16-205ENST00000453689 CSKP41240 450 aa15.08■□□□□ 0
VPS16-205ENST00000453689 HADHBP55084 474 aaKnown RBP15.08■□□□□ 0
VPS16-205ENST00000453689 PIGHQ14442 188 aaPredicted RBP15.08■□□□□ 0
VPS16-205ENST00000453689 PTPRNQ16849 979 aa15.08■□□□□ 0
VPS16-205ENST00000453689 FNDC3BQ53EP0 1204 aaKnown RBP15.08■□□□□ 0
VPS16-205ENST00000453689 PITRM1Q5JRX3 1037 aa15.08■□□□□ 0
VPS16-205ENST00000453689 ARTNQ5T4W7 220 aa15.08■□□□□ 0
VPS16-205ENST00000453689 ACBD5Q5T8D3 534 aaPredicted RBP15.08■□□□□ 0
VPS16-205ENST00000453689 KBTBD6Q86V97 674 aa15.08■□□□□ 0
VPS16-205ENST00000453689 APCDD1Q8J025 514 aa15.08■□□□□ 0
VPS16-205ENST00000453689 FAM160A2Q8N612 972 aaPredicted RBP15.08■□□□□ 0
VPS16-205ENST00000453689 NIPA2Q8N8Q9 360 aa15.08■□□□□ 0
VPS16-205ENST00000453689 CALR3Q96L12 384 aaKnown RBP15.08■□□□□ 0
VPS16-205ENST00000453689 TSGA10Q9BZW7 698 aa15.08■□□□□ 0
VPS16-205ENST00000453689 LACRTQ9GZZ8 138 aa15.08■□□□□ 0
VPS16-205ENST00000453689 IP6K2Q9UHH9 426 aa15.08■□□□□ 0
VPS16-205ENST00000453689 PLA2G4CQ9UP65 541 aa15.08■□□□□ 0
VPS16-205ENST00000453689 FAM186AA6NE01 2351 aa15.08■□□□□ 0
VPS16-205ENST00000453689 PI4KAP42356 2102 aa15.07■□□□□ 0
VPS16-205ENST00000453689 E9PAM4 449 aa15.07■□□□□ 0
VPS16-205ENST00000453689 CLDN11O75508 207 aa15.07■□□□□ 0
VPS16-205ENST00000453689 ASLP04424 464 aa15.07■□□□□ 0
VPS16-205ENST00000453689 HLA-EP13747 358 aa15.07■□□□□ 0
VPS16-205ENST00000453689 MZF1P28698 734 aaPredicted RBP15.07■□□□□ 0
VPS16-205ENST00000453689 ADRA1BP35368 520 aa15.07■□□□□ 0
VPS16-205ENST00000453689 NOP2P46087 812 aaKnown RBP15.07■□□□□ 0
VPS16-205ENST00000453689 CDH4P55283 916 aa15.07■□□□□ 0
VPS16-205ENST00000453689 SLC12A1Q13621 1099 aa15.07■□□□□ 0
VPS16-205ENST00000453689 STARD3Q14849 445 aa15.07■□□□□ 0
VPS16-205ENST00000453689 ACAP1Q15027 740 aa15.07■□□□□ 0
VPS16-205ENST00000453689 PLEKHG6Q3KR16 790 aa15.07■□□□□ 0
VPS16-205ENST00000453689 ARL13BQ3SXY8 428 aa15.07■□□□□ 0
VPS16-205ENST00000453689 USP39Q53GS9 565 aaKnown RBP15.07■□□□□ 0
VPS16-205ENST00000453689 ALFQ53S48 1182 aa15.07■□□□□ 0
VPS16-205ENST00000453689 LAIR1Q6GTX8 287 aa15.07■□□□□ 0
VPS16-205ENST00000453689 LRRC31Q6UY01 552 aa15.07■□□□□ 0
VPS16-205ENST00000453689 CCDC185Q8N715 623 aa15.07■□□□□ 0
VPS16-205ENST00000453689 ZNF366Q8N895 744 aa15.07■□□□□ 0
VPS16-205ENST00000453689 OR52K2Q8NGK3 314 aa15.07■□□□□ 0
VPS16-205ENST00000453689 RLN3Q8WXF3 142 aa15.07■□□□□ 0
VPS16-205ENST00000453689 RUBCNQ92622 972 aa15.07■□□□□ 0
VPS16-205ENST00000453689 MYO19Q96H55 970 aa15.07■□□□□ 0
VPS16-205ENST00000453689 BTBD6Q96KE9 485 aa15.07■□□□□ 0
VPS16-205ENST00000453689 NCAPGQ9BPX3 1015 aa15.07■□□□□ 0
VPS16-205ENST00000453689 SLC6A17Q9H1V8 727 aa15.07■□□□□ 0
VPS16-205ENST00000453689 TMEM245Q9H330 911 aa15.07■□□□□ 0
VPS16-205ENST00000453689 NCDNQ9UBB6 729 aa15.07■□□□□ 0
VPS16-205ENST00000453689 ADAMTS9Q9P2N4 1935 aa15.06■□□□□ 0
VPS16-205ENST00000453689 TP53BP1Q12888 1972 aaPredicted RBP15.06■□□□□ 0
VPS16-205ENST00000453689 IGLV3-10A0A075B6K4 115 aa15.06■□□□□ 0
VPS16-205ENST00000453689 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.06■□□□□ 0
VPS16-205ENST00000453689 DRGXA6NNA5 263 aa15.06■□□□□ 0
VPS16-205ENST00000453689 ZBTB24O43167 697 aaPredicted RBP15.06■□□□□ 0
VPS16-205ENST00000453689 SYNCRIPO60506 623 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms