RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ZYG11BQ9C0D3 744 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 TBC1D17Q9HA65 648 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 LTB4R2Q9NPC1 389 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 CALCOCO1Q9P1Z2 691 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 RCOR3Q9P2K3 495 aaPredicted RBP8.98□□□□□ -0.97
COL28A1-205ENST00000453441 OR12D3Q9UGF7 316 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 FZD10Q9ULW2 581 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 USP18Q9UMW8 372 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 ZDBF2Q9HCK1 2354 aa8.98□□□□□ -0.97
COL28A1-205ENST00000453441 MIA3Q5JRA6 1907 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 COL4A3Q01955 1670 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 DOCK4Q8N1I0 1966 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 CXorf51AA0A1B0GTR3 108 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 PRR33A8MZF0 331 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 E9PAM4 449 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 SCAMP3O14828 347 aaKnown RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 KRT86O43790 486 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 TBL1XO60907 577 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 ATG13O75143 517 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 WFS1O76024 890 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 KAT7O95251 611 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 MOCS3O95396 460 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 AOC1P19801 751 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 PTGIRP43119 386 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 NOP2P46087 812 aaKnown RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 HCAR3P49019 387 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 MAPKAPK2P49137 400 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 GALK1P51570 392 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 ATXN1P54253 815 aaKnown RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 CCZ1BP86790 482 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 CCZ1P86791 482 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 RELBQ01201 579 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF177Q13360 481 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 CDH18Q13634 790 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 DPYSL2Q16555 572 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 GAB4Q2WGN9 574 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 SH3PXD2AQ5TCZ1 1133 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 MANEALQ5VSG8 457 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 RFWD3Q6PCD5 774 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 TRMT11Q7Z4G4 463 aaKnown RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 ANKS1BQ7Z6G8 1248 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 SETD3Q86TU7 594 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 VSIG1Q86XK7 387 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 MFN1Q8IWA4 741 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 MAP7D3Q8IWC1 876 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 SYCE1Q8N0S2 351 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 AHI1Q8N157 1196 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 FBXL6Q8N531 539 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 CCDC185Q8N715 623 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 TERB1Q8NA31 727 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 PJA1Q8NG27 643 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 FIBINQ8TAL6 211 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 UCMAQ8WVF2 138 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 CLDN23Q96B33 292 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 TBC1D31Q96DN5 1066 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 PRICKLE1Q96MT3 831 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 SIK2Q9H0K1 926 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 CATSPERBQ9H7T0 1116 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 PRDM16Q9HAZ2 1276 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 OSGEPQ9NPF4 335 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 ARHGEF4Q9NR80 690 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 DNAJC17Q9NVM6 304 aaKnown RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 KIAA1522Q9P206 1035 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 STIM2Q9P246 746 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 XPO7Q9UIA9 1087 aaKnown RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 VANGL2Q9ULK5 521 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 AP4E1Q9UPM8 1137 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 REXO2Q9Y3B8 237 aaKnown RBP8.97□□□□□ -0.97
COL28A1-205ENST00000453441 STARD13Q9Y3M8 1113 aa8.97□□□□□ -0.97
COL28A1-205ENST00000453441 GOLGA6L7A0A1B0GV03 622 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 FAM170BA6NMN3 283 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 WASH4PA8MWX3 477 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF487B1APH4 448 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 H0Y626 953 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 H3BRJ5 948 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 PSTPIP1O43586 416 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 TSPAN3O60637 253 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 ASLP04424 464 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 CISD3P0C7P0 127 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 RHOQP17081 205 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 HOXC13P31276 330 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 ARL4AP40617 200 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 SOX9P48436 509 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 PLK1P53350 603 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 VCPP55072 806 aaKnown RBP8.96□□□□□ -0.98
COL28A1-205ENST00000453441 TPI1P60174 286 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 MRPS21P82921 87 aaKnown RBP8.96□□□□□ -0.98
COL28A1-205ENST00000453441 SLC25A11Q02978 314 aaKnown RBP8.96□□□□□ -0.98
COL28A1-205ENST00000453441 SULT2A1Q06520 285 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 SEMA3BQ13214 749 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 CCINQ13939 588 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 MESDQ14696 234 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 UBXN2BQ14CS0 331 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 PDK2Q15119 407 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 PON2Q15165 354 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.96□□□□□ -0.98
COL28A1-205ENST00000453441 TMEM31Q5JXX7 168 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 TXNDC11Q6PKC3 985 aa8.96□□□□□ -0.98
COL28A1-205ENST00000453441 RHOT1Q8IXI2 618 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms