RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PRB1P04280 392 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3HP0C7X1 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 LCP1P13796 627 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 PSMD8P48556 350 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 PCBP4P57723 403 aaKnown RBP14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 RPS24P62847 133 aaKnown RBP14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 CNGA2Q16280 664 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 SETMARQ53H47 684 aaPredicted RBP14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 PRAMEF14Q5SWL7 426 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 BROXQ5VW32 411 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3GQ6DHY5 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 NADSYN1Q6IA69 706 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3CQ6IPX1 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 ERICH1Q86X53 443 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3Q8IZP1 549 aaPredicted RBP14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 CARNMT1Q8N4J0 409 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 UBR7Q8N806 425 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 UBA3Q8TBC4 463 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 EEF2KMTQ96G04 330 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 SLC39A13Q96H72 371 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 FCRL2Q96LA5 508 aaPredicted RBP14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 GTPBP4Q9BZE4 634 aaKnown RBP14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 MTG2Q9H4K7 406 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 USP29Q9HBJ7 922 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 EVA1BQ9NVM1 165 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 CYTH4Q9UIA0 394 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 MAPK8IP1Q9UQF2 711 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 GOLGA6L7A0A1B0GV03 622 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 TTC34A8MYJ7 566 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 PRAMEF26H0Y7S4 382 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 CBX4O00257 560 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 PMM2O15305 246 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 PLRG1O43660 514 aaKnown RBP14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 IL1BP01584 269 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 APOEP02649 317 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 HSP90AA1P07900 732 aaKnown RBP14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 PLK1P53350 603 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 TMPRSS3P57727 454 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 INSM1Q01101 510 aaPredicted RBP14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 CFHR1Q03591 330 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 DNM1Q05193 864 aaKnown RBP14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 CCDC15Q0P6D6 951 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 STAT4Q14765 748 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 MEA1Q16626 185 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 CBWD6Q4V339 395 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 COBLL1Q53SF7 1204 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 CBWD3Q5JTY5 395 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 CBWD5Q5RIA9 395 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 TCERG1LQ5VWI1 586 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 PMF1Q6P1K2 205 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 SPACA3Q8IXA5 215 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 FAM174AQ8TBP5 190 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 PTPRN2Q92932 1015 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 BTN2A3PQ96KV6 586 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 PREBQ9HCU5 417 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 TJP2Q9UDY2 1190 aa14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 NYNRINQ9P2P1 1898 aaKnown RBP14.76□□□□□ -0.05
LYSMD3-202ENST00000453259 ZNF462Q96JM2 2506 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 LZTS3O60299 673 aaPredicted RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 GP1BAP07359 652 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 DRD3P35462 400 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 ACADSBP45954 432 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 RPL34P49207 117 aaKnown RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 ERVPABLB-1P60509 514 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 NUCB2P80303 420 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 FKBP3Q00688 224 aaKnown RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 DCAF6Q58WW2 860 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 DCAF17Q5H9S7 520 aaPredicted RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 FSCBQ5H9T9 825 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 NEK5Q6P3R8 708 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 SPATS2Q86XZ4 545 aaKnown RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 STK40Q8N2I9 435 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 OR4C6Q8NH72 309 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 DQX1Q8TE96 717 aaKnown RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 OR8D1Q8WZ84 308 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 GRAMD1AQ96CP6 724 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 IFT43Q96FT9 208 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 LGMNQ99538 433 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 TSG101Q99816 390 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 NUCKS1Q9H1E3 243 aaKnown RBP14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 RMND1Q9NWS8 449 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 ARHGAP20Q9P2F6 1191 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 SLCO3A1Q9UIG8 710 aa14.75□□□□□ -0.05
LYSMD3-202ENST00000453259 C1QTNF3-AMACRE9PGA6 284 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 J3QKU1 62 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 M0QYV0 167 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 WNT9AO14904 365 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 ALPPL2P10696 532 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 SLC2A3P11169 496 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 PPP2CBP62714 309 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 PPP2CAP67775 309 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 KRT85P78386 507 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 LRRC63Q05C16 580 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 BNIP3Q12983 259 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 FOXD4L5Q5VV16 416 aaPredicted RBP14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 IGF2-ASQ6U949 168 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 TMEM270Q6UE05 265 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 KRBA2Q6ZNG9 492 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms