RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CDH18Q13634 790 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 SLC45A4Q5BKX6 768 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 DCAF17Q5H9S7 520 aaPredicted RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 HES3Q5TGS1 186 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 TCERG1LQ5VWI1 586 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 ANKRD40Q6AI12 368 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 TMEM270Q6UE05 265 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 LRRC69Q6ZNQ3 347 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 RBM43Q6ZSC3 357 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 IQCHQ86VS3 1027 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 SPATS2Q86XZ4 545 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 CCDC117Q8IWD4 279 aaPredicted RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 SMYD4Q8IYR2 804 aaPredicted RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 SNIP1Q8TAD8 396 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 SPATA20Q8TB22 786 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 SERAC1Q96JX3 654 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 SERPINB11Q96P15 392 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 KDM4CQ9H3R0 1056 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 RAI2Q9Y5P3 530 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 AK5Q9Y6K8 562 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 SLC7A4O43246 635 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 C1QL1O75973 258 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 CKMT2P17540 419 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 ACP1P24666 158 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 MZF1P28698 734 aaPredicted RBP12.05□□□□□ -0.48
HERC3-207ENST00000452979 DRD3P35462 400 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 NUDT1P36639 197 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
HERC3-207ENST00000452979 PLK1P53350 603 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 SEMG2Q02383 582 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 OVGP1Q12889 678 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 LRMPQ12912 555 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 SLC12A1Q13621 1099 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
HERC3-207ENST00000452979 CCDC183Q5T5S1 534 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 ZNF658Q5TYW1 1059 aaPredicted RBP12.05□□□□□ -0.48
HERC3-207ENST00000452979 NAPEPLDQ6IQ20 393 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
HERC3-207ENST00000452979 APCDD1Q8J025 514 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 STK40Q8N2I9 435 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 OR14C36Q8NHC7 312 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 BAP1Q92560 729 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 TSG101Q99816 390 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 MIS12Q9H081 205 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 ARMCX3Q9UH62 379 aaPredicted RBP12.05□□□□□ -0.48
HERC3-207ENST00000452979 NAALADL1Q9UQQ1 740 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 DMTF1Q9Y222 760 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 PCDHB4Q9Y5E5 795 aa12.05□□□□□ -0.48
HERC3-207ENST00000452979 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3DA0A087WVF3 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3IA0A087WXS9 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3EA0A087X179 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3KA0A087X1G2 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3FA6NER0 549 aaPredicted RBP12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3LB9A6J9 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 M0QYV0 167 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 MAGEC1O60732 1142 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 IL1BP01584 269 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 PRB1P04280 392 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3HP0C7X1 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 GPD2P43304 727 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 PSMD8P48556 350 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 FMO5P49326 533 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 LRRC63Q05C16 580 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 EIF4EBP2Q13542 120 aaPredicted RBP12.04□□□□□ -0.48
HERC3-207ENST00000452979 PROX2Q3B8N5 592 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 SYPL2Q5VXT5 272 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 RNF219Q5W0B1 726 aaPredicted RBP12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3GQ6DHY5 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3CQ6IPX1 549 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.04□□□□□ -0.48
HERC3-207ENST00000452979 TBC1D3Q8IZP1 549 aaPredicted RBP12.04□□□□□ -0.48
HERC3-207ENST00000452979 DCBLD1Q8N8Z6 715 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 LMO3Q8TAP4 145 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 FRS2Q8WU20 508 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 FGF11Q92914 225 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 RPL10LQ96L21 214 aaKnown RBP12.04□□□□□ -0.48
HERC3-207ENST00000452979 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 CYTH4Q9UIA0 394 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 CLCA2Q9UQC9 943 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 DOCK9Q9BZ29 2069 aa12.04□□□□□ -0.48
HERC3-207ENST00000452979 HELZ2Q9BYK8 2649 aaKnown RBP12.04□□□□□ -0.48
HERC3-207ENST00000452979 ASXL3Q9C0F0 2248 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 SETXQ7Z333 2677 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 TEX51A0A1B0GUA7 166 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 SART1O43290 800 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 KALRNO60229 2985 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 IGLV3-25P01717 112 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 TACR2P21452 398 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 BMP6P22004 513 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 GLDCP23378 1020 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 BRD2P25440 801 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 ACTN2P35609 894 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms