RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ARVCFO00192 962 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 AP2A1O95782 977 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 ETV4P43268 484 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 NUP93Q8N1F7 819 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 RFWD2Q8NHY2 731 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 LRRC37BQ96QE4 947 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 ATXN3LQ9H3M9 355 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 ZNF395Q9H8N7 513 aaPredicted RBP12.05□□□□□ -0.48
VTA1-203ENST00000452973 ADAM28Q9UKQ2 775 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 SLC12A4Q9UP95 1085 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 SQORQ9Y6N5 450 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 THSD7BQ9C0I4 1608 aa12.05□□□□□ -0.48
VTA1-203ENST00000452973 ENPP3O14638 875 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 GSTA2P09210 222 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 KITP10721 976 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 CCNB1P14635 433 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 SELPP16109 830 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 CCL23P55773 120 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ZCCHC23Q6ZST2 131 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 CNTD1Q8N815 330 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 IPMKQ8NFU5 416 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 AGAP2Q99490 1192 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 SLC39A8Q9C0K1 460 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ZCWPW1Q9H0M4 648 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 MYLK2Q9H1R3 596 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 GBA3Q9H227 469 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 EIF2B3Q9NR50 452 aaKnown RBP12.04□□□□□ -0.48
VTA1-203ENST00000452973 KANSL3Q9P2N6 904 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PLLPQ9Y342 182 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 TPP1O14773 563 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 OAZ2O95190 189 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ALADP13716 330 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ALDH3A1P30838 453 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 TMPRSS15P98073 1019 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PLEKHG4Q58EX7 1191 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 HSP90AA5PQ58FG0 334 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PPM1JQ5JR12 505 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ITPRIPL1Q6GPH6 555 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ZNF449Q6P9G9 518 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PACS1Q6VY07 963 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 TEKT5Q96M29 485 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 TRIM62Q9BVG3 475 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 SMOC2Q9H3U7 446 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 TMEM161AQ9NX61 479 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PCDH10Q9P2E7 1040 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 MARCOQ9UEW3 520 aaPredicted RBP12.04□□□□□ -0.48
VTA1-203ENST00000452973 CHKBQ9Y259 395 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 STK38LQ9Y2H1 464 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PCDHB5Q9Y5E4 795 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 USH1CQ9Y6N9 552 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ALDH2P05091 517 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 TROVE2P10155 538 aaKnown RBP eCLIP12.04□□□□□ -0.48
VTA1-203ENST00000452973 SAT1P21673 171 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 KCNJ2P63252 427 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PSMD5Q16401 504 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 NFE2Q16621 373 aaPredicted RBP12.04□□□□□ -0.48
VTA1-203ENST00000452973 RGS9BPQ6ZS82 235 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
VTA1-203ENST00000452973 GIPC2Q8TF65 315 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 KLHL29Q96CT2 875 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 CERS2Q96G23 380 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ZNF778Q96MU6 729 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 PLCD4Q9BRC7 762 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 OSBPL2Q9H1P3 480 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 ARHGEF38Q9NXL2 777 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 HS3ST4Q9Y661 456 aa12.04□□□□□ -0.48
VTA1-203ENST00000452973 CASP8AP2Q9UKL3 1982 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 E9PAM4 449 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 PMPCBO75439 489 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 IGLV3-25P01717 112 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 HNRNPH1P31943 449 aaKnown RBP12.03□□□□□ -0.48
VTA1-203ENST00000452973 FAM189BP81408 668 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 CHI3L2Q15782 390 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 RNF43Q68DV7 783 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 NUDCD3Q8IVD9 361 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 CNPY4Q8N129 248 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 ANKLE1Q8NAG6 615 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 ZNF296Q8WUU4 475 aaPredicted RBP12.03□□□□□ -0.48
VTA1-203ENST00000452973 FBXO32Q969P5 355 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 TBC1D31Q96DN5 1066 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 ZNF419Q96HQ0 510 aaPredicted RBP12.03□□□□□ -0.48
VTA1-203ENST00000452973 PPP1R12CQ9BZL4 782 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 LRRC40Q9H9A6 602 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 MTSS1O43312 755 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 ALDOAP04075 364 aaKnown RBP12.03□□□□□ -0.48
VTA1-203ENST00000452973 TARSP26639 723 aaKnown RBP12.03□□□□□ -0.48
VTA1-203ENST00000452973 SERPINB9P50453 376 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 NCALDP61601 193 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 PRPSAP1Q14558 356 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 POU6F1Q14863 301 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 RSPO2Q6UXX9 243 aaPredicted RBP12.03□□□□□ -0.48
VTA1-203ENST00000452973 CMC1Q7Z7K0 106 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 MON1AQ86VX9 555 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 PPP1R14CQ8TAE6 165 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms