RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MUC3BQ9H195 1237 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 CATSPERBQ9H7T0 1116 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ZDHHC4Q9NPG8 344 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 FAM86C1Q9NVL1 165 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 POLR3BQ9NW08 1133 aaPredicted RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 MPP6Q9NZW5 540 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 BCCIPQ9P287 314 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 PCSK1NQ9UHG2 260 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ANAPC7Q9UJX3 599 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 VPS28Q9UK41 221 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 INTS6Q9UL03 887 aaKnown RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 USP18Q9UMW8 372 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 NENFQ9UMX5 172 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ERVW-1Q9UQF0 538 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 R4GN57 208 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 GREB1Q4ZG55 1949 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 A0A1W2PQF6 199 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 TCRBV21S2A2A0A5A6 115 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 TARSL2A2RTX5 802 aaKnown RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 PROB1E7EW31 1015 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 DAPK3O43293 454 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 CREB3O43889 395 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF217O75362 1048 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 LRIG2O94898 1065 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 EPHX1P07099 455 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 MZF1P28698 734 aaPredicted RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 EPHB2P29323 1055 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 MIPP30301 263 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 ETFBP38117 255 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 MAPKAPK2P49137 400 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 VASPP50552 380 aaPredicted RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 SLC20A2Q08357 652 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 SFSWAPQ12872 951 aaKnown RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 FUT11Q495W5 492 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 ALFQ53S48 1182 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 ANO7Q6IWH7 933 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 CXorf57Q6NSI4 855 aaKnown RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 CEP68Q76N32 757 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 TFAP2DQ7Z6R9 452 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 APCDD1Q8J025 514 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 NIPA2Q8N8Q9 360 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF564Q8TBZ8 553 aaPredicted RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 CYB5D2Q8WUJ1 264 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 HMGB4Q8WW32 186 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 SORCS1Q8WY21 1168 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 ARHGEF26Q96DR7 871 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 SPON2Q9BUD6 331 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 C2orf49Q9BVC5 232 aaPredicted RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 TRIM7Q9C029 511 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 TMEM245Q9H330 911 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 DHX35Q9H5Z1 703 aaKnown RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 SLC25A13Q9UJS0 675 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 RAB23Q9ULC3 237 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 EPN1Q9Y6I3 576 aaPredicted RBP9.12□□□□□ -0.95
COL8A1-203ENST00000452013 MYO10Q9HD67 2058 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 PATJQ8NI35 1801 aa9.12□□□□□ -0.95
COL8A1-203ENST00000452013 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 FAM72CH0Y354 149 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 FGF10O15520 208 aaPredicted RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 HRO43593 1189 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 RNASEH1O60930 286 aaKnown RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 LRCH4O75427 683 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 RPP40O75818 363 aaKnown RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 PROSCO94903 275 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 LMNAP02545 664 aaKnown RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 ARHGAP25P42331 645 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 SSR1P43307 286 aaKnown RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 HCAR3P49019 387 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 IRAK1P51617 712 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 YBEYP58557 167 aaPredicted RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 GNA12Q03113 381 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 DMWDQ09019 674 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF252P-AS1Q0IIN9 211 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 CAMK2GQ13555 558 aaPredicted RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 SIM2Q14190 667 aaPredicted RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 TCEAL1Q15170 157 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 PTPRNQ16849 979 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 ACCSLQ4AC99 568 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 FAM72AQ5TYM5 149 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 MANEALQ5VSG8 457 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 IL31Q6EBC2 164 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 FAM72DQ6L9T8 149 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 RETSATQ6NUM9 610 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 METTL3Q86U44 580 aaKnown RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 FAM72BQ86X60 149 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 TMPRSS6Q8IU80 811 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 PYROXD2Q8N2H3 581 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 ARFGAP1Q8N6T3 406 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 SPC24Q8NBT2 197 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 OR2T3Q8NH03 318 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 SLC35G2Q8TBE7 412 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 UBE2Q2Q8WVN8 375 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 GAB3Q8WWW8 586 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 PRCCQ92733 491 aaPredicted RBP9.11□□□□□ -0.95
COL8A1-203ENST00000452013 ALG14Q96F25 216 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 PACSIN1Q9BY11 444 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms