RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 MRPS17Q9Y2R5 130 aaKnown RBP24.72■■□□□ 1.55
CPSF4-207ENST00000451876 A0A0A0MRY4 1105 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 A0A0D9SEW6 157 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 TBC1D3BA6NDS4 549 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 FAM170BA6NMN3 283 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 WASH4PA8MWX3 477 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 DAPK3O43293 454 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 RHOCP08134 193 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 CHRNB1P11230 501 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 DRD1P21728 446 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 AMPD1P23109 780 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 CTNNA2P26232 953 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 SETD3Q86TU7 594 aaPredicted RBP24.71■■□□□ 1.55
CPSF4-207ENST00000451876 CCDC105Q8IYK2 499 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 KATNAL2Q8IYT4 538 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 APCDD1Q8J025 514 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 ALG3Q92685 438 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 EXOC4Q96A65 974 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 RNF25Q96BH1 459 aaPredicted RBP24.71■■□□□ 1.55
CPSF4-207ENST00000451876 ALS2CR12Q96Q35 445 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 ZNF670Q9BS34 389 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 ETNK2Q9NVF9 386 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 DDX56Q9NY93 547 aaKnown RBP24.71■■□□□ 1.55
CPSF4-207ENST00000451876 RCOR3Q9P2K3 495 aaPredicted RBP24.71■■□□□ 1.55
CPSF4-207ENST00000451876 PCDHA3Q9Y5H8 950 aa24.71■■□□□ 1.55
CPSF4-207ENST00000451876 MAPKAPK2P49137 400 aa24.7■■□□□ 1.54
CPSF4-207ENST00000451876 C6orf118Q5T5N4 469 aa24.7■■□□□ 1.54
CPSF4-207ENST00000451876 AHI1Q8N157 1196 aa24.7■■□□□ 1.54
CPSF4-207ENST00000451876 NPWQ8N729 165 aa24.7■■□□□ 1.54
CPSF4-207ENST00000451876 ALG14Q96F25 216 aa24.7■■□□□ 1.54
CPSF4-207ENST00000451876 NOL6Q9H6R4 1146 aaKnown RBP24.7■■□□□ 1.54
CPSF4-207ENST00000451876 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.7■■□□□ 1.54
CPSF4-207ENST00000451876 CCDC66A2RUB6 948 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 DCLK1O15075 740 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 PEX5P50542 639 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 PLEKHG6Q3KR16 790 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 PREPLQ4J6C6 727 aaPredicted RBP24.69■■□□□ 1.54
CPSF4-207ENST00000451876 ANKRD20A8PQ5CZ79 823 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 PITRM1Q5JRX3 1037 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 RNF219Q5W0B1 726 aaPredicted RBP24.69■■□□□ 1.54
CPSF4-207ENST00000451876 MFSD7Q6UXD7 560 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 MAP7D3Q8IWC1 876 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 C17orf53Q8N3J3 647 aaPredicted RBP24.69■■□□□ 1.54
CPSF4-207ENST00000451876 TRIM58Q8NG06 486 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 PCDH19Q8TAB3 1148 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 FAF2Q96CS3 445 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 ZDHHC4Q9NPG8 344 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 HCN2Q9UL51 889 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 OR51B4Q9Y5P0 310 aa24.69■■□□□ 1.54
CPSF4-207ENST00000451876 CHRM1P11229 460 aaPredicted RBP24.68■■□□□ 1.54
CPSF4-207ENST00000451876 SEC13P55735 322 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 EMC10Q5UCC4 262 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 Q6ZS52 159 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 NETO2Q8NC67 525 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 OR7D4Q8NG98 312 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 SORCS1Q8WY21 1168 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 HES6Q96HZ4 224 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 NELL2Q99435 816 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 FEM1AQ9BSK4 669 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 CIPCQ9C0C6 399 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 KLC2Q9H0B6 622 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 MUC3BQ9H195 1237 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 RETREG1Q9H6L5 497 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 C11orf16Q9NQ32 467 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 DDX3YO15523 660 aaKnown RBP24.68■■□□□ 1.54
CPSF4-207ENST00000451876 PI15O43692 258 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 DNA2P51530 1060 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 LLGL1Q15334 1064 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 MBLAC2Q68D91 279 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 WFIKKN2Q8TEU8 576 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 LMAN1LQ9HAT1 526 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 SIT1Q9Y3P8 196 aa24.68■■□□□ 1.54
CPSF4-207ENST00000451876 ILVBLA1L0T0 632 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 FAM86C2PA6NEL3 165 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 MIF4GDA9UHW6 222 aaKnown RBP24.67■■□□□ 1.54
CPSF4-207ENST00000451876 RNF40O75150 1001 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 DCNP07585 359 aaKnown RBP24.67■■□□□ 1.54
CPSF4-207ENST00000451876 ACVRL1P37023 503 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 KIR2DL1P43626 348 aaPredicted RBP24.67■■□□□ 1.54
CPSF4-207ENST00000451876 GNA12Q03113 381 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 SLC12A1Q13621 1099 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 ODF2Q5BJF6 829 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 MEI1Q5TIA1 1274 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 PQLC3Q8N755 202 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 CELF6Q96J87 481 aaKnown RBP24.67■■□□□ 1.54
CPSF4-207ENST00000451876 PSMB7Q99436 277 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 VPS28Q9UK41 221 aa24.67■■□□□ 1.54
CPSF4-207ENST00000451876 ZDBF2Q9HCK1 2354 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 RAMP2O60895 175 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 ZRANB2O95218 330 aaKnown RBP eCLIP24.66■■□□□ 1.54
CPSF4-207ENST00000451876 CDKN2BP42772 138 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 TNFRSF4P43489 277 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 PLK1P53350 603 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 DCAF12L1Q5VU92 463 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 NCBP2-AS2Q69YL0 99 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 VSIG1Q86XK7 387 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 TP53INP2Q8IXH6 220 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 UMODL1-AS1Q8N2C9 162 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 EXD1Q8NHP7 514 aa24.66■■□□□ 1.54
CPSF4-207ENST00000451876 PBXIP1Q96AQ6 731 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms