RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 BNIPLQ7Z465 357 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 PIP4P1Q86T03 277 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 DEFB119Q8N690 84 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 NEK11Q8NG66 645 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 C1orf216Q8TAB5 229 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 BPIFA3Q9BQP9 254 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 FEM1AQ9BSK4 669 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 TKTL2Q9H0I9 626 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
SGCE-208ENST00000450385 TMEM59LQ9UK28 342 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 SIK3Q9Y2K2 1263 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 HS3ST4Q9Y661 456 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 ACACBO00763 2458 aa16.51■□□□□ 0.23
SGCE-208ENST00000450385 DRGXA6NNA5 263 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 ALOX15BO15296 676 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 ATP9BO43861 1147 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 DFNA5O60443 496 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 SIN3BO75182 1162 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 PNMA6AP0CW24 399 aaPredicted RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 ZNF18P17022 549 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 C5AR1P21730 350 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 MMP8P22894 467 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 NUDT1P36639 197 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 COPB1P53618 953 aaKnown RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 GSCP56915 257 aaPredicted RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 RNASE9P60153 205 aaKnown RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 CCDC15Q0P6D6 951 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 TEAD4Q15561 434 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 CST6Q15828 149 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 UAP1L1Q3KQV9 507 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 CXorf57Q6NSI4 855 aaKnown RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 MINDY1Q8N5J2 469 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 SKA1Q96BD8 255 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 CD93Q9NPY3 652 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 PIGVQ9NUD9 493 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 SLC25A13Q9UJS0 675 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 NOCTQ9UK39 431 aaKnown RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 VANGL2Q9ULK5 521 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
SGCE-208ENST00000450385 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.5■□□□□ 0.23
SGCE-208ENST00000450385 ATXN2Q99700 1313 aaKnown RBP16.49■□□□□ 0.23
SGCE-208ENST00000450385 CABIN1Q9Y6J0 2220 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 IGLV3-10A0A075B6K4 115 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 SYNJ2BP-COX16A0A087WUM0 186 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 LRRC72A6NJI9 287 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 SMTNL1A8MU46 457 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 GJB3O75712 270 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 TRIM16O95361 564 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 CER1O95813 267 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 MMEP08473 750 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 GOT1P17174 413 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 CD27P26842 260 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 ACSL1P33121 698 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 MAPK8P45983 427 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 SULT1E1P49888 294 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 UBXN1Q04323 297 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 SLC20A2Q08357 652 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 ARL13BQ3SXY8 428 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 TAF3Q5VWG9 929 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 FAM46CQ5VWP2 391 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 APCDD1Q8J025 514 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 KNL1Q8NG31 2342 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 CPA5Q8WXQ8 436 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 PTPRN2Q92932 1015 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 ALG14Q96F25 216 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 FAM129BQ96TA1 746 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 OMDQ99983 421 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 C2orf49Q9BVC5 232 aaPredicted RBP16.49■□□□□ 0.23
SGCE-208ENST00000450385 GTPBP2Q9BX10 602 aaKnown RBP16.49■□□□□ 0.23
SGCE-208ENST00000450385 FAM207AQ9NSI2 230 aaPredicted RBP16.49■□□□□ 0.23
SGCE-208ENST00000450385 FBXL12Q9NXK8 326 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 COX16Q9P0S2 106 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 PPARGC1AQ9UBK2 798 aaKnown RBP16.49■□□□□ 0.23
SGCE-208ENST00000450385 SLCO3A1Q9UIG8 710 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 FARP1Q9Y4F1 1045 aaPredicted RBP16.49■□□□□ 0.23
SGCE-208ENST00000450385 PCDHGB2Q9Y5G2 931 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 OR51B4Q9Y5P0 310 aa16.49■□□□□ 0.23
SGCE-208ENST00000450385 SLC7A4O43246 635 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 GFPT2O94808 682 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 ADCY5O95622 1261 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 PDGFRAP16234 1089 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 SLC8A1P32418 973 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 GRIA4P48058 902 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 CCR5P51681 352 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 CLCN6P51797 869 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 FMO1Q01740 532 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 NRG1Q02297 640 aaPredicted RBP16.48■□□□□ 0.23
SGCE-208ENST00000450385 SYCP1Q15431 976 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 C6orf118Q5T5N4 469 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 NAA35Q5VZE5 725 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 MMS22LQ6ZRQ5 1243 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 STRADAQ7RTN6 431 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 ZNF366Q8N895 744 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 OR2T34Q8NGX1 318 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 FRS2Q8WU20 508 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 IGSF8Q969P0 613 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 ERLEC1Q96DZ1 483 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 CCDC114Q96M63 670 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 SIK2Q9H0K1 926 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms