RNA–Protein interactions for RNA: ENST00000450295.5

SEMA4D-212, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-212ENST00000450295 PCDH20Q8N6Y1 951 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-212ENST00000450295 BAP1Q92560 729 aa13.17□□□□□ -0.3
SEMA4D-212ENST00000450295 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-212ENST00000450295 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
SEMA4D-212ENST00000450295 ERI2A8K979 691 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 VPS26AO75436 327 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 JCHAINP01591 159 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 NUDT17P0C025 328 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ALOX12P18054 663 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 GSSP48637 474 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 DDX39BQ13838 428 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ITIH5Q86UX2 942 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 CROCCP3Q8IVE0 287 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 DGCR6LQ9BY27 220 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ATAD3AQ9NVI7 634 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 F5H5T6 163 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 MLNP12872 115 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 GLRA2P23416 452 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 DGUOKQ16854 277 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 NOL9Q5SY16 702 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 TMEM139Q8IV31 216 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 BDH2Q9BUT1 245 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ANKRD6Q9Y2G4 727 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 PCDHAC2Q9Y5I4 1007 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 DYTNA2CJ06 578 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 TMEM150BA6NC51 233 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 CCDC154A6NI56 674 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 F8W810 466 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 STX7O15400 261 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ZNF177Q13360 481 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 OVOS1Q6IE37 1185 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 C19orf18Q8NEA5 215 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 LENG1Q96BZ8 264 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ELOVL4Q9GZR5 314 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 PCDHB5Q9Y5E4 795 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 AHDC1Q5TGY3 1603 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 SMIM22K7EJ46 135 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 CSDE1O75534 798 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 LDLRP01130 860 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 CYP1A2P05177 515 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 RRM2P31350 389 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 ARHGEF7Q14155 803 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 TAF5Q15542 800 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 OMA1Q96E52 524 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 FAM120BQ96EK7 910 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 C9orf16Q9BUW7 83 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 RIBC2Q9H4K1 309 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
SEMA4D-212ENST00000450295 A0A087WXM4 84 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 PDK4Q16654 411 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 DDR2Q16832 855 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 ARMC4Q5T2S8 1044 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 EID3Q8N140 333 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 HTR3CQ8WXA8 447 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 MAGED4Q96JG8 741 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 NSMCE2Q96MF7 247 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 ACP6Q9NPH0 428 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 TMA7Q9Y2S6 64 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 CNOT3O75175 753 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 WFS1O76024 890 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 CCDC130P13994 396 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 MBOAT7Q96N66 472 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 ZMYND8Q9ULU4 1186 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 F8VP50 259 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 LIASO43766 372 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 EML3Q32P44 896 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 KYAT3Q6YP21 454 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 POLNQ7Z5Q5 900 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 TSPAN14Q8NG11 270 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 KAT5Q92993 513 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 CELF6Q96J87 481 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 PLEKHG4BQ96PX9 1271 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 MID1IP1Q9NPA3 183 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 DDX43Q9NXZ2 648 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 PCDHA11Q9Y5I1 949 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 COX4I1P13073 169 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 SLC2A4P14672 509 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 NDST1P52848 882 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 MARSP56192 900 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
SEMA4D-212ENST00000450295 SLC44A2Q8IWA5 706 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms