RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ITIH6Q6UXX5 1313 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 BCAT2O15382 392 aaPredicted RBP15.73■□□□□ 0.11
CHD3-205ENST00000449744 CLDN11O75508 207 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 ZNF18P17022 549 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 PMLP29590 882 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 CXCR3P49682 368 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 STK19P49842 368 aaPredicted RBP15.73■□□□□ 0.11
CHD3-205ENST00000449744 PLK1P53350 603 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 CDR2Q01850 454 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 SYCP1Q15431 976 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 CST6Q15828 149 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 SLC25A52Q3SY17 297 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 C2CD6Q53TS8 623 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 C9orf64Q5T6V5 341 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 OTUD1Q5VV17 481 aaPredicted RBP15.73■□□□□ 0.11
CHD3-205ENST00000449744 LRRC31Q6UY01 552 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 USP30Q70CQ3 517 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 MMAAQ8IVH4 418 aaKnown RBP15.73■□□□□ 0.11
CHD3-205ENST00000449744 NEK11Q8NG66 645 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 OR2I1PQ8NGU4 316 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 SLC20A1Q8WUM9 679 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 PGAP3Q96FM1 320 aaPredicted RBP15.73■□□□□ 0.11
CHD3-205ENST00000449744 TBCBQ99426 244 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 OMDQ99983 421 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 C6orf106Q9H6K1 298 aaPredicted RBP15.73■□□□□ 0.11
CHD3-205ENST00000449744 FBXL12Q9NXK8 326 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 ARHGEF38Q9NXL2 777 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 LIMA1Q9UHB6 759 aaKnown RBP15.73■□□□□ 0.11
CHD3-205ENST00000449744 SLC25A13Q9UJS0 675 aa15.73■□□□□ 0.11
CHD3-205ENST00000449744 RNASEH2AO75792 299 aaKnown RBP15.72■□□□□ 0.11
CHD3-205ENST00000449744 FSBPO95073 299 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 ADCY5O95622 1261 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 TFE3P19532 575 aaPredicted RBP15.72■□□□□ 0.11
CHD3-205ENST00000449744 FLT3P36888 993 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 CDH4P55283 916 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 UBXN1Q04323 297 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 GRIK2Q13002 908 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 SEMA3BQ13214 749 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 ST3GAL2Q16842 350 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 ACCSLQ4AC99 568 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 ACBD5Q5T8D3 534 aaPredicted RBP15.72■□□□□ 0.11
CHD3-205ENST00000449744 CXorf57Q6NSI4 855 aaKnown RBP15.72■□□□□ 0.11
CHD3-205ENST00000449744 TRIM72Q6ZMU5 477 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 C14orf80Q86SX3 495 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 NT5C3BQ969T7 300 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 MUC3BQ9H195 1237 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 DNAAF2Q9NVR5 837 aaKnown RBP15.72■□□□□ 0.11
CHD3-205ENST00000449744 NOCTQ9UK39 431 aaKnown RBP15.72■□□□□ 0.11
CHD3-205ENST00000449744 VPS28Q9UK41 221 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 SIK3Q9Y2K2 1263 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.72■□□□□ 0.11
CHD3-205ENST00000449744 PCDH15Q96QU1 1955 aa15.72■□□□□ 0.11
CHD3-205ENST00000449744 A0A1W2PP55 124 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 FAM47DPA6NHR8 397 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 LGALS16A8MUM7 142 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 UPK3BL1B0FP48 263 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 UPK3BL2E5RIL1 263 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 EPHB6O15197 1021 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 MID1O15344 667 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 CYP1A1P04798 512 aaPredicted RBP15.71■□□□□ 0.11
CHD3-205ENST00000449744 RHOCP08134 193 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 SLC8A1P32418 973 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 RDXP35241 583 aaKnown RBP15.71■□□□□ 0.11
CHD3-205ENST00000449744 PSMD8P48556 350 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 IRAK1P51617 712 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 JAM2P57087 298 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 FMO1Q01740 532 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 FOXC1Q12948 553 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 SLC14A1Q13336 389 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 ELAVL3Q14576 367 aaKnown RBP15.71■□□□□ 0.11
CHD3-205ENST00000449744 TEAD4Q15561 434 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 C5orf22Q49AR2 442 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 IL27RAQ6UWB1 636 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 STK40Q8N2I9 435 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 PTPRN2Q92932 1015 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 BIRC7Q96CA5 298 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 CFAP57Q96MR6 1250 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 FEM1AQ9BSK4 669 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 ADAM33Q9BZ11 813 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
CHD3-205ENST00000449744 METTL5Q9NRN9 209 aaKnown RBP15.71■□□□□ 0.11
CHD3-205ENST00000449744 TMEM59LQ9UK28 342 aa15.71■□□□□ 0.11
CHD3-205ENST00000449744 LRRC72A6NJI9 287 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 CER1O95813 267 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 ADH1BP00325 375 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 IL1BP01584 269 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 C5AR1P21730 350 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 MMP8P22894 467 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 AFF3P51826 1226 aaKnown RBP15.7■□□□□ 0.1
CHD3-205ENST00000449744 KRT83P78385 493 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 TYRO3Q06418 890 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 HNRNPDQ14103 355 aaKnown RBP15.7■□□□□ 0.1
CHD3-205ENST00000449744 KIAA0895LQ68EN5 471 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 ARCQ7LC44 396 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 DSG4Q86SJ6 1040 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 PIP4P1Q86T03 277 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 AOPEPQ8N6M6 819 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 OR8D1Q8WZ84 308 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 ALG14Q96F25 216 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 C1orf74Q96LT6 269 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms