RNA–Protein interactions for RNA: ENST00000449260.6

PMEL-201, Transcript of premelanosome protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PMEL, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-201ENST00000449260 USP12O75317 370 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 ZNF189O75820 626 aaPredicted RBP13.09□□□□□ -0.31
PMEL-201ENST00000449260 KRT38O76015 456 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 GPR15P49685 360 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 MGAT5Q09328 741 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 ZBTB17Q13105 803 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 EIF4EBP2Q13542 120 aaPredicted RBP13.09□□□□□ -0.31
PMEL-201ENST00000449260 EP400NLQ6ZTU2 488 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 ZNF276Q8N554 614 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 PGLYRP2Q96PD5 576 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 GORASP1Q9BQQ3 440 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 SLC13A1Q9BZW2 595 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 VPS11Q9H270 941 aa13.09□□□□□ -0.31
PMEL-201ENST00000449260 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.31
PMEL-201ENST00000449260 PAGE1O75459 146 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 RFPL1O75677 317 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
PMEL-201ENST00000449260 JCHAINP01591 159 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 NEFHP12036 1026 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 PGAM1P18669 254 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 CD68P34810 354 aaPredicted RBP13.08□□□□□ -0.32
PMEL-201ENST00000449260 ETV4P43268 484 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 SMAD1Q15797 465 aaKnown RBP13.08□□□□□ -0.32
PMEL-201ENST00000449260 TEX44Q53QW1 395 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 BRMS1LQ5PSV4 323 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
PMEL-201ENST00000449260 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 CES3Q6UWW8 571 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 CDHR3Q6ZTQ4 885 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 CYS1Q717R9 158 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 CCNJLQ8IV13 435 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 MTBPQ96DY7 904 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 HAPLN3Q96S86 360 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 SRPK1Q96SB4 655 aaKnown RBP13.08□□□□□ -0.32
PMEL-201ENST00000449260 IQCGQ9H095 443 aaKnown RBP13.08□□□□□ -0.32
PMEL-201ENST00000449260 SMOC2Q9H3U7 446 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 MANSC1Q9H8J5 431 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 TMEM161AQ9NX61 479 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 SLC17A6Q9P2U8 582 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 TRHDEQ9UKU6 1024 aa13.08□□□□□ -0.32
PMEL-201ENST00000449260 MRPL42Q9Y6G3 142 aaKnown RBP13.08□□□□□ -0.32
PMEL-201ENST00000449260 HMX2A2RU54 273 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 DFFAO00273 331 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 ALDH1A2O94788 518 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 AP2A1O95782 977 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 GSTA1P08263 222 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 DHRS4L1P0CG22 281 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 CCR1P32246 355 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 SERPINB9P50453 376 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 CRYMQ14894 314 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 FITM2Q8N6M3 262 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 USP33Q8TEY7 942 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 FCRL2Q96LA5 508 aaPredicted RBP13.07□□□□□ -0.32
PMEL-201ENST00000449260 GBA3Q9H227 469 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 HAUS2Q9NVX0 235 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 OSER1Q9NX31 292 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 SLC12A4Q9UP95 1085 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 UPP2O95045 317 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 MOCS2O96007 188 aaPredicted RBP13.07□□□□□ -0.32
PMEL-201ENST00000449260 CXCL10P02778 98 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 RAG1P15918 1043 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 NFKB1P19838 968 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 ITGB8P26012 769 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 GATMP50440 423 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 ARPP19P56211 112 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 CTXN3Q4LDR2 81 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 FAM171A1Q5VUB5 890 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 ITPRIPL1Q6GPH6 555 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 NUP93Q8N1F7 819 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.07□□□□□ -0.32
PMEL-201ENST00000449260 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 CDKL2Q92772 493 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 TRIM43Q96BQ3 446 aaPredicted RBP13.07□□□□□ -0.32
PMEL-201ENST00000449260 B3GALT6Q96L58 329 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 NAT9Q9BTE0 207 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 MLPHQ9BV36 600 aaPredicted RBP13.07□□□□□ -0.32
PMEL-201ENST00000449260 RXFP1Q9HBX9 757 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 UBP1Q9NZI7 540 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 IL1RAPL1Q9NZN1 696 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
PMEL-201ENST00000449260 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.06□□□□□ -0.32
PMEL-201ENST00000449260 ARHGAP42A6NI28 874 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 DNAJC8O75937 253 aaPredicted RBP13.06□□□□□ -0.32
PMEL-201ENST00000449260 CSF2RAP15509 400 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 COG7P83436 770 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 IKBKEQ14164 716 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 NFE2Q16621 373 aaPredicted RBP13.06□□□□□ -0.32
PMEL-201ENST00000449260 GALNTL6Q49A17 601 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 ARHGAP36Q6ZRI8 547 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 MARK2Q7KZI7 788 aaKnown RBP13.06□□□□□ -0.32
PMEL-201ENST00000449260 NDUFAF2Q8N183 169 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 TTC9BQ8N6N2 239 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 ATAD1Q8NBU5 361 aa13.06□□□□□ -0.32
PMEL-201ENST00000449260 GPR152Q8TDT2 470 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms