RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 ELOVL4Q9GZR5 314 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 ARL8BQ9NVJ2 186 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 VPS9D1Q9Y2B5 631 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 SNCAIPQ9Y6H5 919 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 MYH14Q7Z406 1995 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 LRP6O75581 1613 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 POM121CA8CG34 1229 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 GPR25O00155 361 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 RAMP2O60895 175 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
BEST1-202ENST00000449131 MTA2O94776 668 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 CYP1A1P04798 512 aaPredicted RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 CFHP08603 1231 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 SERPINF2P08697 491 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 CD48P09326 243 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 TPBGLP0DKB5 382 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 TSHRP16473 764 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 NELFEP18615 380 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 NFKB1P19838 968 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 PKNOX1P55347 436 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 NFYCQ13952 458 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 NOMO1Q15155 1222 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 XYLT1Q86Y38 959 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 GLIS1Q8NBF1 620 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 ZSCAN18Q8TBC5 510 aaPredicted RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 DIS3LQ8TF46 1054 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 VAT1Q99536 393 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 TBL1YQ9BQ87 522 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 TMEM109Q9BVC6 243 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 PIF1Q9H611 641 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 CDHR5Q9HBB8 845 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 SYTL2Q9HCH5 934 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 CCDC167Q9P0B6 97 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 PCDHA11Q9Y5I1 949 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 NR2E3Q9Y5X4 410 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 PRRC2BQ5JSZ5 2229 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 ADGRA3Q8IWK6 1321 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 NRCAMQ92823 1304 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 HEATR9A2RTY3 570 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 BAIAP3O94812 1187 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 ASMTLO95671 621 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 ALBP02768 609 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 UNGP13051 313 aaPredicted RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 TCF4P15884 667 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 RAG1P15918 1043 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 PSMC3P17980 439 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 ATP4AP20648 1035 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 MAPK10P53779 464 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 GBE1Q04446 702 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 PEX6Q13608 980 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 UBAP2LQ14157 1087 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 FSCN1Q16658 493 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 ANKRD22Q5VYY1 191 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 NEPROQ6NW34 567 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 CRELD2Q6UXH1 353 aaPredicted RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 ZBTB49Q6ZSB9 765 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 TTC30BQ8N4P2 665 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 LZTR1Q8N653 840 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 C12orf50Q8NA57 414 aaPredicted RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 ZNF398Q8TD17 642 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 GDPD5Q8WTR4 605 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 C18orf25Q96B23 403 aaPredicted RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 SPATA17Q96L03 361 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 MARK4Q96L34 752 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 ANKRD27Q96NW4 1050 aa7.29□□□□□ -1.24
BEST1-202ENST00000449131 MTG1Q9BT17 334 aaPredicted RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 NIFKQ9BYG3 293 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 NXF3Q9H4D5 531 aaKnown RBP7.29□□□□□ -1.24
BEST1-202ENST00000449131 ZMYM2Q9UBW7 1377 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 FAM95CA0A1B0GW59 222 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 SYNDIG1LA6NDD5 238 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 C16orf96A6NNT2 1141 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 HOXA2O43364 376 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 LYPLA1O75608 230 aaPredicted RBP7.28□□□□□ -1.24
BEST1-202ENST00000449131 CRTAMO95727 393 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 ALDH1A1P00352 501 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 RHOCP08134 193 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 F7P08709 466 aaPredicted RBP7.28□□□□□ -1.24
BEST1-202ENST00000449131 SMIM10L2AP0DMW4 78 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 SMIM10L2BP0DMW5 78 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 ZNF23P17027 643 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 OR1E1P30953 314 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 HSPA13P48723 471 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 DDX39BQ13838 428 aaKnown RBP7.28□□□□□ -1.24
BEST1-202ENST00000449131 SYTL3Q4VX76 610 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 FNBP1LQ5T0N5 605 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 WLSQ5T9L3 541 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 ZNF280DQ6N043 979 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 CXCL17Q6UXB2 119 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 TNS4Q8IZW8 715 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 ZNF516Q92618 1163 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 PRKD2Q9BZL6 878 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 GOLGA2P5Q9HBQ8 144 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 RGS18Q9NS28 235 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 EFR3BQ9Y2G0 817 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 CRYL1Q9Y2S2 319 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 MAFBQ9Y5Q3 323 aaPredicted RBP7.28□□□□□ -1.24
BEST1-202ENST00000449131 DOT1LQ8TEK3 1739 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 CCDC189A1A4V9 331 aa7.28□□□□□ -1.24
BEST1-202ENST00000449131 DPPA5A6NC42 116 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms