RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CXCR3P49682 368 aa15.03■□□□□ -0
USP39-206ENST00000448971 STARD3Q14849 445 aa15.03■□□□□ -0
USP39-206ENST00000448971 E2F5Q15329 346 aa15.03■□□□□ -0
USP39-206ENST00000448971 C15orf59Q2T9L4 293 aaPredicted RBP15.03■□□□□ -0
USP39-206ENST00000448971 SPECC1LQ69YQ0 1117 aa15.03■□□□□ -0
USP39-206ENST00000448971 DCUN1D2Q6PH85 259 aa15.03■□□□□ -0
USP39-206ENST00000448971 MCOLN2Q8IZK6 566 aa15.03■□□□□ -0
USP39-206ENST00000448971 PGBD3Q8N328 593 aa15.03■□□□□ -0
USP39-206ENST00000448971 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.03■□□□□ -0
USP39-206ENST00000448971 HMGB4Q8WW32 186 aa15.03■□□□□ -0
USP39-206ENST00000448971 NT5C3BQ969T7 300 aa15.03■□□□□ -0
USP39-206ENST00000448971 ERLEC1Q96DZ1 483 aa15.03■□□□□ -0
USP39-206ENST00000448971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.03■□□□□ -0
USP39-206ENST00000448971 SIK2Q9H0K1 926 aa15.03■□□□□ -0
USP39-206ENST00000448971 TMEM51Q9NW97 253 aa15.03■□□□□ -0
USP39-206ENST00000448971 ELOVL2Q9NXB9 296 aa15.03■□□□□ -0
USP39-206ENST00000448971 ARHGEF38Q9NXL2 777 aa15.03■□□□□ -0
USP39-206ENST00000448971 MBD1Q9UIS9 605 aaPredicted RBP15.03■□□□□ -0
USP39-206ENST00000448971 CAPN11Q9UMQ6 739 aa15.03■□□□□ -0
USP39-206ENST00000448971 RAD54BQ9Y620 910 aa15.03■□□□□ -0
USP39-206ENST00000448971 NBEAQ8NFP9 2946 aa15.03■□□□□ -0
USP39-206ENST00000448971 LAMA5O15230 3695 aa15.02■□□□□ -0
USP39-206ENST00000448971 PLXND1Q9Y4D7 1925 aa15.02■□□□□ -0
USP39-206ENST00000448971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.02■□□□□ -0
USP39-206ENST00000448971 C2CD4BA6NLJ0 364 aa15.02■□□□□ -0
USP39-206ENST00000448971 ZBTB24O43167 697 aaPredicted RBP15.02■□□□□ -0
USP39-206ENST00000448971 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
USP39-206ENST00000448971 RRM1P23921 792 aa15.02■□□□□ -0
USP39-206ENST00000448971 PTGER3P43115 390 aa15.02■□□□□ -0
USP39-206ENST00000448971 PTPN9P43378 593 aa15.02■□□□□ -0
USP39-206ENST00000448971 LMAN2Q12907 356 aa15.02■□□□□ -0
USP39-206ENST00000448971 AUHQ13825 339 aaKnown RBP15.02■□□□□ -0
USP39-206ENST00000448971 ZNF234Q14588 700 aa15.02■□□□□ -0
USP39-206ENST00000448971 MAP7D1Q3KQU3 841 aa15.02■□□□□ -0
USP39-206ENST00000448971 UAP1L1Q3KQV9 507 aa15.02■□□□□ -0
USP39-206ENST00000448971 ARL13BQ3SXY8 428 aa15.02■□□□□ -0
USP39-206ENST00000448971 FUT11Q495W5 492 aa15.02■□□□□ -0
USP39-206ENST00000448971 FNDC3BQ53EP0 1204 aaKnown RBP15.02■□□□□ -0
USP39-206ENST00000448971 TRIM61Q5EBN2 209 aa15.02■□□□□ -0
USP39-206ENST00000448971 MBLAC2Q68D91 279 aa15.02■□□□□ -0
USP39-206ENST00000448971 FBXL22Q6P050 247 aa15.02■□□□□ -0
USP39-206ENST00000448971 SERPINA13PQ6UXR4 307 aa15.02■□□□□ -0
USP39-206ENST00000448971 TMEFF1Q8IYR6 380 aa15.02■□□□□ -0
USP39-206ENST00000448971 DEFB124Q8NES8 71 aa15.02■□□□□ -0
USP39-206ENST00000448971 FAM172AQ8WUF8 416 aa15.02■□□□□ -0
USP39-206ENST00000448971 SORCS1Q8WY21 1168 aa15.02■□□□□ -0
USP39-206ENST00000448971 ZNF653Q96CK0 615 aa15.02■□□□□ -0
USP39-206ENST00000448971 PRMT1Q99873 361 aaKnown RBP15.02■□□□□ -0
USP39-206ENST00000448971 GABRG3Q99928 467 aa15.02■□□□□ -0
USP39-206ENST00000448971 HCN2Q9UL51 889 aa15.02■□□□□ -0
USP39-206ENST00000448971 BZW2Q9Y6E2 419 aaKnown RBP15.02■□□□□ -0
USP39-206ENST00000448971 STON1Q9Y6Q2 735 aa15.02■□□□□ -0
USP39-206ENST00000448971 TMEM8BA6NDV4 472 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 DDX3XO00571 662 aaKnown RBP eCLIP15.01□□□□□ -0.019e-13■■■■□ 21.9
USP39-206ENST00000448971 NPC1O15118 1278 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 CCP110O43303 1012 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 MOCS3O95396 460 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 SERPING1P05155 500 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 ATP5BP06576 529 aaKnown RBP15.01□□□□□ -0.01
USP39-206ENST00000448971 POLR2EP19388 210 aaKnown RBP15.01□□□□□ -0.01
USP39-206ENST00000448971 RFC1P35251 1148 aaPredicted RBP15.01□□□□□ -0.01
USP39-206ENST00000448971 IL12RB1P42701 662 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 CCDC14Q49A88 953 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 SPDYCQ5MJ68 293 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 TMEM215Q68D42 235 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 SLC23A3Q6PIS1 610 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 WDR59Q6PJI9 974 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 LRRC31Q6UY01 552 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 LPCAT2Q7L5N7 544 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 PIP4P1Q86T03 277 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 DNAAF5Q86Y56 855 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 SYT12Q8IV01 421 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 VSTM4Q8IW00 320 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 CCAR2Q8N163 923 aaKnown RBP15.01□□□□□ -0.01
USP39-206ENST00000448971 FIBINQ8TAL6 211 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 CYB5D2Q8WUJ1 264 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 SYN2Q92777 582 aaPredicted RBP15.01□□□□□ -0.01
USP39-206ENST00000448971 TRIM11Q96F44 468 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 ANLNQ9NQW6 1124 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 TMPRSS4Q9NRS4 437 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 THAP10Q9P2Z0 257 aaPredicted RBP15.01□□□□□ -0.01
USP39-206ENST00000448971 CEP192Q8TEP8 1941 aa15.01□□□□□ -0.01
USP39-206ENST00000448971 ADAMTS9Q9P2N4 1935 aa15□□□□□ -0.01
USP39-206ENST00000448971 SIGLEC16A6NMB1 481 aa15□□□□□ -0.01
USP39-206ENST00000448971 SRRM3A6NNA2 597 aaPredicted RBP15□□□□□ -0.01
USP39-206ENST00000448971 WASH3PC4AMC7 463 aa15□□□□□ -0.01
USP39-206ENST00000448971 TIMM44O43615 452 aa15□□□□□ -0.01
USP39-206ENST00000448971 SYNCRIPO60506 623 aaKnown RBP15□□□□□ -0.01
USP39-206ENST00000448971 EPHX1P07099 455 aa15□□□□□ -0.01
USP39-206ENST00000448971 FSCBQ5H9T9 825 aa15□□□□□ -0.01
USP39-206ENST00000448971 PITRM1Q5JRX3 1037 aa15□□□□□ -0.01
USP39-206ENST00000448971 PEAR1Q5VY43 1037 aaPredicted RBP15□□□□□ -0.01
USP39-206ENST00000448971 HGSNATQ68CP4 663 aa15□□□□□ -0.01
USP39-206ENST00000448971 KIAA1211LQ6NV74 962 aa15□□□□□ -0.01
USP39-206ENST00000448971 STRADAQ7RTN6 431 aa15□□□□□ -0.01
USP39-206ENST00000448971 BNIPLQ7Z465 357 aa15□□□□□ -0.01
USP39-206ENST00000448971 ADIPOR2Q86V24 386 aa15□□□□□ -0.01
USP39-206ENST00000448971 IGSF8Q969P0 613 aa15□□□□□ -0.01
USP39-206ENST00000448971 VCPIP1Q96JH7 1222 aa15□□□□□ -0.01
USP39-206ENST00000448971 SPACA7Q96KW9 195 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms