RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 POLR3FQ9H1D9 316 aaPredicted RBP16.37■□□□□ 0.21
CNOT3-204ENST00000447684 NXF1Q9UBU9 619 aaKnown RBP16.37■□□□□ 0.21
CNOT3-204ENST00000447684 BTAF1O14981 1849 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 TIPRLO75663 272 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 CLIC3O95833 236 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 GLDCP23378 1020 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 CNTFP26441 200 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 ZNF132P52740 706 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 NEDD8Q15843 81 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 PLD6Q8N2A8 252 aaKnown RBP16.37■□□□□ 0.21
CNOT3-204ENST00000447684 PLD5Q8N7P1 536 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 HM13Q8TCT9 377 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 LRRC39Q96DD0 335 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 TARS2Q9BW92 718 aaKnown RBP16.37■□□□□ 0.21
CNOT3-204ENST00000447684 GABBR1Q9UBS5 961 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 SEPT9Q9UHD8 586 aaPredicted RBP16.37■□□□□ 0.21
CNOT3-204ENST00000447684 CCPG1Q9ULG6 757 aa16.37■□□□□ 0.21
CNOT3-204ENST00000447684 LRRIQ4A6NIV6 560 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 CFAP99D6REC4 459 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 ACOT8O14734 319 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 AKAP10O43572 662 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 ERVK-10P10266 1014 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 ZNF182P17025 639 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 PMS2P3Q13401 168 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 TRIM16LQ309B1 348 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 FAM102AQ5T9C2 384 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 IFNLR1Q8IU57 520 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 ACMSDQ8TDX5 336 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 PGLYRP2Q96PD5 576 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 MTMR12Q9C0I1 747 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 HAPLN2Q9GZV7 340 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 POLR1BQ9H9Y6 1135 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 ANKEF1Q9NU02 776 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 KDM1AO60341 852 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 NOL3O60936 208 aaKnown RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 TFE3P19532 575 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 METTL21CQ5VZV1 264 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 SEL1L3Q68CR1 1132 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 NIPAL1Q6NVV3 410 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 ZNF534Q76KX8 674 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 SLC15A4Q8N697 577 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 PQLC3Q8N755 202 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 AGAP3Q96P47 875 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 ILKAPQ9H0C8 392 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-204ENST00000447684 TMEM98Q9Y2Y6 226 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 CORINQ9Y5Q5 1042 aa16.36■□□□□ 0.21
CNOT3-204ENST00000447684 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 ERBB2P04626 1255 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 RAP1GAPP47736 663 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 STILQ15468 1287 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 FAM47CQ5HY64 1035 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 STXBP5Q5T5C0 1151 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 SCAIQ8N9R8 606 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 CGRRF1Q99675 332 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 ADPGKQ9BRR6 497 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 ZNF518BQ9C0D4 1074 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 CNOT11Q9UKZ1 510 aaKnown RBP16.35■□□□□ 0.21
CNOT3-204ENST00000447684 APOL1O14791 398 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 TPST1O60507 370 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 LTFP02788 710 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 SAT1P21673 171 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 MAP4P27816 1152 aaKnown RBP16.35■□□□□ 0.21
CNOT3-204ENST00000447684 HSD17B4P51659 736 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 LDLRAP1Q5SW96 308 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 LAYNQ6UX15 382 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 CHST15Q7LFX5 561 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-204ENST00000447684 CYGBQ8WWM9 190 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 SREK1Q8WXA9 508 aaKnown RBP16.35■□□□□ 0.21
CNOT3-204ENST00000447684 TMEM143Q96AN5 459 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 DCPSQ96C86 337 aaKnown RBP16.35■□□□□ 0.21
CNOT3-204ENST00000447684 RNF157Q96PX1 679 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 APBA2Q99767 749 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
CNOT3-204ENST00000447684 SNX15Q9NRS6 342 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 MOCS1Q9NZB8 636 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 MAGED2Q9UNF1 606 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-204ENST00000447684 FIS1Q9Y3D6 152 aa16.35■□□□□ 0.21
CNOT3-204ENST00000447684 TRIM38O00635 465 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 SOCS2O14508 198 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 NDUFB5O43674 189 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
CNOT3-204ENST00000447684 GTF2A2P52657 109 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 YWHAEP62258 255 aaKnown RBP16.34■□□□□ 0.21
CNOT3-204ENST00000447684 DLG2Q15700 870 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 GALNT18Q6P9A2 607 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 RSBN1LQ6PCB5 846 aaPredicted RBP16.34■□□□□ 0.21
CNOT3-204ENST00000447684 ZBTB33Q86T24 672 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 SIX6OS1Q8N1H7 587 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 CHURC1Q8WUH1 139 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 TAMM41Q96BW9 452 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 CAB39LQ9H9S4 337 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 SACM1LQ9NTJ5 587 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 ARHGAP28Q9P2N2 729 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 UBIAD1Q9Y5Z9 338 aa16.34■□□□□ 0.21
CNOT3-204ENST00000447684 ZNF839A8K0R7 811 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms