RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 MRPS23Q9Y3D9 190 aaKnown RBP25.53■■□□□ 1.68
RFFL-206ENST00000447669 WASH4PA8MWX3 477 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 CHKAP35790 457 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 AVPR1AP37288 418 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 PAPOLAP51003 745 aaKnown RBP25.52■■□□□ 1.68
RFFL-206ENST00000447669 WASHC5Q12768 1159 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 CALCOCO2Q13137 446 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 SH3RF2Q8TEC5 729 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 USP13Q92995 863 aaPredicted RBP25.52■■□□□ 1.68
RFFL-206ENST00000447669 RTP4Q96DX8 246 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 TASP1Q9H6P5 420 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 ANAPC5Q9UJX4 755 aa25.52■■□□□ 1.68
RFFL-206ENST00000447669 HACD1B0YJ81 288 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 RNF103O00237 685 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 OR1E1P30953 314 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 PPIDQ08752 370 aaKnown RBP25.51■■□□□ 1.67
RFFL-206ENST00000447669 MTM1Q13496 603 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 HMCESQ96FZ2 354 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 SH3BP1Q9Y3L3 701 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 GOLGA8MH3BSY2 632 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 DNALI1O14645 258 aaPredicted RBP25.51■■□□□ 1.67
RFFL-206ENST00000447669 METTL18O95568 372 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 ITIH2P19823 946 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 BASP1P80723 227 aaKnown RBP25.51■■□□□ 1.67
RFFL-206ENST00000447669 ARHGAP15Q53QZ3 475 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 AFMIDQ63HM1 303 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 USP33Q8TEY7 942 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 AZIN2Q96A70 460 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 FMO2Q99518 471 aa25.51■■□□□ 1.67
RFFL-206ENST00000447669 ZBTB17Q13105 803 aa25.5■■□□□ 1.67
RFFL-206ENST00000447669 RHBDF2Q6PJF5 856 aa25.5■■□□□ 1.67
RFFL-206ENST00000447669 LEKR1Q6ZMV7 388 aa25.5■■□□□ 1.67
RFFL-206ENST00000447669 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.5■■□□□ 1.67
RFFL-206ENST00000447669 TSEN2Q8NCE0 465 aaKnown RBP25.5■■□□□ 1.67
RFFL-206ENST00000447669 CPT1BQ92523 772 aa25.5■■□□□ 1.67
RFFL-206ENST00000447669 HDAC11Q96DB2 347 aa25.5■■□□□ 1.67
RFFL-206ENST00000447669 ZNF419Q96HQ0 510 aaPredicted RBP25.5■■□□□ 1.67
RFFL-206ENST00000447669 NSUN3Q9H649 340 aaKnown RBP25.5■■□□□ 1.67
RFFL-206ENST00000447669 SFXN1Q9H9B4 322 aa25.5■■□□□ 1.67
RFFL-206ENST00000447669 TPX2Q9ULW0 747 aaKnown RBP25.5■■□□□ 1.67
RFFL-206ENST00000447669 A0A0D9SEW6 157 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 CFAP69A5D8W1 941 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 SASH3O75995 380 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 ACVRL1P37023 503 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 C5orf22Q49AR2 442 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 ANKRD20A2Q5SQ80 823 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 UBAP2Q5T6F2 1119 aaKnown RBP25.49■■□□□ 1.67
RFFL-206ENST00000447669 RNASEH2BQ5TBB1 312 aaKnown RBP25.49■■□□□ 1.67
RFFL-206ENST00000447669 ANKRD20A1Q5TYW2 823 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 ANKRD20A3Q5VUR7 823 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 HIBCHQ6NVY1 386 aaPredicted RBP25.49■■□□□ 1.67
RFFL-206ENST00000447669 ZNF567Q8N184 647 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 UMODL1-AS1Q8N2C9 162 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 RAB6BQ9NRW1 208 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 PLK2Q9NYY3 685 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 MAFKO60675 156 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 MAP9Q49MG5 647 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 TPGS1Q6ZTW0 290 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 CCDC25Q86WR0 208 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 ATPAF2Q8N5M1 289 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 TTYH1Q9H313 450 aaPredicted RBP25.49■■□□□ 1.67
RFFL-206ENST00000447669 STOML2Q9UJZ1 356 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 ARHGAP26Q9UNA1 814 aa25.49■■□□□ 1.67
RFFL-206ENST00000447669 RASA4BC9J798 803 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 J3KR12 359 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 RASA4O43374 803 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 FGF19O95750 216 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 MX2P20592 715 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 PTPN3P26045 913 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 RGS19P49795 217 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 SYCE2Q6PIF2 218 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 HTR3DQ70Z44 454 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 ZNF354CQ86Y25 554 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 ARID3BQ8IVW6 561 aaPredicted RBP25.48■■□□□ 1.67
RFFL-206ENST00000447669 LZTR1Q8N653 840 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 ZSCAN18Q8TBC5 510 aaPredicted RBP25.48■■□□□ 1.67
RFFL-206ENST00000447669 CCHCR1Q8TD31 782 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 ETNK1Q9HBU6 452 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 TDP1Q9NUW8 608 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 LSM7Q9UK45 103 aaKnown RBP25.48■■□□□ 1.67
RFFL-206ENST00000447669 RAD54BQ9Y620 910 aa25.48■■□□□ 1.67
RFFL-206ENST00000447669 C5orf60A6NFR6 353 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 NCAM2O15394 837 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 TBL1XO60907 577 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 GCATO75600 419 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 ACTN2P35609 894 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 DLX2Q07687 328 aaPredicted RBP25.47■■□□□ 1.67
RFFL-206ENST00000447669 ELMSAN1Q6PJG2 1045 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 CCDC13Q8IYE1 715 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 LRRC45Q96CN5 670 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 AGAP3Q96P47 875 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 FUT8Q9BYC5 575 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 JCHAINP01591 159 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 GRIN2CQ14957 1233 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 POLD3Q15054 466 aaPredicted RBP25.47■■□□□ 1.67
RFFL-206ENST00000447669 RABGAP1LQ5R372 815 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 EMBQ6PCB8 327 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 EP400NLQ6ZTU2 488 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 LEMD2Q8NC56 503 aa25.47■■□□□ 1.67
RFFL-206ENST00000447669 CDCA3Q99618 268 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms