RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PDK2Q15119 407 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 PLEKHG6Q3KR16 790 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 ALFQ53S48 1182 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 KCNT1Q5JUK3 1230 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 MANEALQ5VSG8 457 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 IL31Q6EBC2 164 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 POLNQ7Z5Q5 900 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 RHOT1Q8IXI2 618 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 ZNF683Q8IZ20 524 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 SYCE1Q8N0S2 351 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 CCDC33Q8N5R6 958 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 ARFGAP1Q8N6T3 406 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 RTL3Q8N8U3 475 aaKnown RBP14.48□□□□□ -0.09
SSBP3-208ENST00000444533 TXNDC5Q8NBS9 432 aaKnown RBP14.48□□□□□ -0.09
SSBP3-208ENST00000444533 WFDC5Q8TCV5 224 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 DESI2Q9BSY9 194 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 SPON2Q9BUD6 331 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 DDX56Q9NY93 547 aaKnown RBP14.48□□□□□ -0.09
SSBP3-208ENST00000444533 FBXO4Q9UKT5 387 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 COL4A3Q01955 1670 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 KIAA1549LQ6ZVL6 1849 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 FAM72CH0Y354 149 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 SRPRAP08240 638 aaKnown RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 RARAP10276 462 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 TNNT1P13805 278 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 HOXB2P14652 356 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 HCAR3P49019 387 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 PLK1P53350 603 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 CDH6P55285 790 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 GEMIN4P57678 1058 aaKnown RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 SLC25A11Q02978 314 aaKnown RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 GNA12Q03113 381 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 CSTF1Q05048 431 aaKnown RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 MESP2Q0VG99 397 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 POLD3Q15054 466 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 FUT11Q495W5 492 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 FSCBQ5H9T9 825 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 FAM72AQ5TYM5 149 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 EMC10Q5UCC4 262 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 DAB2IPQ5VWQ8 1189 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 EGFLAMQ63HQ2 1017 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 FAM72DQ6L9T8 149 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 CXorf57Q6NSI4 855 aaKnown RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 RETSATQ6NUM9 610 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 C11orf63Q6NUN7 778 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 RFX8Q6ZV50 586 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 KIAA0907Q7Z7F0 614 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 ADIPOR2Q86V24 386 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 FAM72BQ86X60 149 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 CAMKK1Q8N5S9 505 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 IL17RCQ8NAC3 791 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 TSTD1Q8NFU3 115 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 TTC17Q96AE7 1141 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 PEBP4Q96S96 227 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 KCTD15Q96SI1 283 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 FEM1AQ9BSK4 669 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 CALN1Q9BXU9 219 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 MAK16Q9BXY0 300 aaKnown RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 FAM126AQ9BYI3 521 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 MAGEH1Q9H213 219 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 ATP13A1Q9HD20 1204 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 BCCIPQ9P287 314 aaKnown RBP eCLIP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 RCOR3Q9P2K3 495 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 THAP10Q9P2Z0 257 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-208ENST00000444533 SUN2Q9UH99 717 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 DNAI1Q9UI46 699 aa14.47□□□□□ -0.09
SSBP3-208ENST00000444533 ZDBF2Q9HCK1 2354 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 MACROD2A1Z1Q3 448 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 PJA2O43164 708 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 BUB1O43683 1085 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 BUB1BO60566 1050 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-208ENST00000444533 APBB3O95704 486 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 IL1R2P27930 398 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 MZF1P28698 734 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-208ENST00000444533 HOXC13P31276 330 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 SERPINB6P35237 376 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 IRAK1P51617 712 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 YBEYP58557 167 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-208ENST00000444533 ZNF234Q14588 700 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 ANGPT1Q15389 498 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 CRY1Q16526 586 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 PARP15Q460N3 678 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 LRRC38Q5VT99 294 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 ZC3H14Q6PJT7 736 aaKnown RBP14.46□□□□□ -0.09
SSBP3-208ENST00000444533 TMCO3Q6UWJ1 677 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 SFTPA1Q8IWL2 248 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 PGBD3Q8N328 593 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 LZTR1Q8N653 840 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 DCAF4L2Q8NA75 395 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 KDM1BQ8NB78 822 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 KIAA1524Q8TCG1 905 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-208ENST00000444533 CYB5D2Q8WUJ1 264 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 EZH1Q92800 747 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-208ENST00000444533 P2RY11Q96G91 374 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 CCDC114Q96M63 670 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 CACNA2D2Q9NY47 1150 aa14.46□□□□□ -0.09
SSBP3-208ENST00000444533 FARP1Q9Y4F1 1045 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-208ENST00000444533 STON1Q9Y6Q2 735 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms