RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC02048-201ENST00000440556 NXF1Q9UBU9 619 aaKnown RBP14.01□□□□□ -0.17
LINC02048-201ENST00000440556 SLC9A2Q9UBY0 812 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 MID2Q9UJV3 735 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 PCDHGC3Q9UN70 934 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 SATB2Q9UPW6 733 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 PCDHB4Q9Y5E5 795 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 CORINQ9Y5Q5 1042 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 CROCCQ5TZA2 2017 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 SLC15A5A6NIM6 579 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 CD247P20963 164 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 PKNOX1P55347 436 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 KRT76Q01546 638 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 TFDP2Q14188 446 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 SLC9B1Q4ZJI4 515 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 VWA5B1Q5TIE3 1220 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 SLX4IPQ5VYV7 408 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 ANKRD13BQ86YJ7 626 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 LRRC49Q8IUZ0 686 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 MAP4K3Q8IVH8 894 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 HERC6Q8IVU3 1022 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 ZSWIM2Q8NEG5 633 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 OR13F1Q8NGS4 319 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 LILRB4Q8NHJ6 448 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 RIT2Q99578 217 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 SLC29A1Q99808 456 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 ZNF385DQ9H6B1 395 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 NANOGQ9H9S0 305 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 KCNQ5Q9NR82 932 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 PKD2L2Q9NZM6 624 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 SNX13Q9Y5W8 968 aa14.01□□□□□ -0.17
LINC02048-201ENST00000440556 C9IYK1 514 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 VAPBO95292 243 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 GARTP22102 1010 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 KRT6CP48668 564 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 KPNA1P52294 538 aaPredicted RBP14□□□□□ -0.17
LINC02048-201ENST00000440556 CLDN10P78369 228 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 MPP1Q00013 466 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 SLC25A11Q02978 314 aaKnown RBP14□□□□□ -0.17
LINC02048-201ENST00000440556 MERTKQ12866 999 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 CUL2Q13617 745 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 E2F2Q14209 437 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 NOMO1Q15155 1222 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 MAPRE2Q15555 327 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 B3GNT9Q6UX72 402 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 KCTD8Q6ZWB6 473 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 GPD1LQ8N335 351 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 GOLM1Q8NBJ4 401 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 OR7G1Q8NGA0 311 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 CYP2W1Q8TAV3 490 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 SPATA18Q8TC71 538 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 FEM1CQ96JP0 617 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 WDR18Q9BV38 432 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 ILKAPQ9H0C8 392 aaPredicted RBP14□□□□□ -0.17
LINC02048-201ENST00000440556 RAD21L1Q9H4I0 556 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 RAB6BQ9NRW1 208 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 TBX20Q9UMR3 447 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 TIMM22Q9Y584 194 aa14□□□□□ -0.17
LINC02048-201ENST00000440556 LRRIQ4A6NIV6 560 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 MYO1DO94832 1006 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 CHEK2O96017 543 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 CALCAP01258 141 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 HSPA8P11142 646 aaKnown RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 VDRP11473 427 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 POLR2BP30876 1174 aaKnown RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 CA8P35219 290 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 GARSP41250 739 aaKnown RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 MAGEA3P43357 314 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 PRKCQQ04759 706 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 SNX17Q15036 470 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 SLC36A3Q495N2 470 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 TXNRD3NBQ6F5E7 133 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 TATDN1Q6P1N9 297 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 CHSY3Q70JA7 882 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 C11orf74Q86VG3 221 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 CAND1Q86VP6 1230 aaKnown RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 TDRD5Q8NAT2 981 aaKnown RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 TMEM35BQ8NCS4 154 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 SEPT8Q92599 483 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 SH3YL1Q96HL8 342 aaPredicted RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 C9orf16Q9BUW7 83 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 ADI1Q9BV57 179 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 UNC93B1Q9H1C4 597 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 UPF3AQ9H1J1 476 aaKnown RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 SEMA6AQ9H2E6 1030 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 THG1LQ9NWX6 298 aaKnown RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 MOCS1Q9NZB8 636 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 NYAP2Q9P242 653 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 WRAP73Q9P2S5 460 aaPredicted RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 SAE1Q9UBE0 346 aaPredicted RBP13.99□□□□□ -0.17
LINC02048-201ENST00000440556 TCAF1Q9Y4C2 921 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 HEATR9A2RTY3 570 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 NOTOA8MTQ0 251 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 PLOD2O00469 737 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 HDAC3O15379 428 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 STAM2O75886 525 aa13.99□□□□□ -0.17
LINC02048-201ENST00000440556 DNAJB5O75953 348 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms