RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CSH2P0DML3 217 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 NFKB1P19838 968 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 FOXN2P32314 431 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CCNFP41002 786 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 PDK4Q16654 411 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MGAT5BQ3V5L5 792 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 PIK3R6Q5UE93 754 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 RNF19BQ6ZMZ0 732 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 LRRC49Q8IUZ0 686 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 RNF168Q8IYW5 571 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ZNF683Q8IZ20 524 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ATPAF2Q8N5M1 289 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ANKS4BQ8N8V4 417 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ZNF784Q8NCA9 323 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MTBPQ96DY7 904 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 OXNAD1Q96HP4 312 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 APOPT1Q96IL0 206 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SERAC1Q96JX3 654 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MLPHQ9BV36 600 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 CRISPLD1Q9H336 500 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 SYBUQ9NX95 663 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 MTRRQ9UBK8 725 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 LTBP2Q14767 1821 aa12.06□□□□□ -0.48
SMAD3-202ENST00000439724 ARHGAP42A6NI28 874 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TRIM49D1C9J1S8 452 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 KRT38O76015 456 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 MOCS2O96007 188 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 JCHAINP01591 159 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 IGLV3-27P01718 113 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 ZDHHC11BP0C7U3 371 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 ALADP13716 330 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 DNAJB2P25686 324 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 CNTFP26441 200 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 PBX3P40426 434 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TUBP50607 506 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 NEK3P51956 506 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 SESN2P58004 480 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TLE2Q04725 743 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TAF10Q12962 218 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 IFT88Q13099 833 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 FRG1Q14331 258 aaKnown RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 PRPSAP1Q14558 356 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 CRYMQ14894 314 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 SPANXN3Q5MJ09 141 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 ACBD5Q5T8D3 534 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 HHATQ5VTY9 493 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 SLC8B1Q6J4K2 584 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TIGD7Q6NT04 549 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 CASC4Q6P4E1 433 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 LVRNQ6Q4G3 990 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TAS1R1Q7RTX1 841 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 C14orf80Q86SX3 495 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 CNTD1Q8N815 330 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 ATP6V0D2Q8N8Y2 350 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 GRAMD1AQ96CP6 724 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 AGAP3Q96P47 875 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 IL12RB2Q99665 862 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 SEPT5Q99719 369 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 ELAC2Q9BQ52 826 aaKnown RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TRIM56Q9BRZ2 755 aaKnown RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TTLL2Q9BWV7 592 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 SLC39A8Q9C0K1 460 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 LRRC40Q9H9A6 602 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 PRDM5Q9NQX1 630 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 MKS1Q9NXB0 559 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 PPARGC1AQ9UBK2 798 aaKnown RBP12.05□□□□□ -0.48
SMAD3-202ENST00000439724 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 SLC27A5Q9Y2P5 690 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 BACE2Q9Y5Z0 518 aa12.05□□□□□ -0.48
SMAD3-202ENST00000439724 IGLV3-10A0A075B6K4 115 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 AP3B1O00203 1094 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 DFFAO00273 331 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 MATN3O15232 486 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 UGT1A9O60656 530 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 MAFKO60675 156 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 LPXNO60711 386 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 SOAT2O75908 522 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 DHRS4L1P0CG22 281 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 CCNB1P14635 433 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 RHOQP17081 205 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 ALDH7A1P49419 539 aaKnown RBP12.04□□□□□ -0.48
SMAD3-202ENST00000439724 CRADDP78560 199 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 RING1Q06587 406 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 EFEMP1Q12805 493 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 MTA1Q13330 715 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 IKBKEQ14164 716 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 USP41Q3LFD5 358 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 NAPEPLDQ6IQ20 393 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 PRSS55Q6UWB4 352 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-202ENST00000439724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMAD3-202ENST00000439724 DEFB128Q7Z7B8 93 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 ZNF276Q8N554 614 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 OR52K1Q8NGK4 314 aa12.04□□□□□ -0.48
SMAD3-202ENST00000439724 TCP10LQ8TDR4 215 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms