RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 VPS16Q9H269 839 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 SLCO3A1Q9UIG8 710 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 VPS28Q9UK41 221 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 TPX2Q9ULW0 747 aaKnown RBP19.37■□□□□ 0.69
CCDC78-204ENST00000439619 HS3ST4Q9Y661 456 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 SPAARA0A1B0GVQ0 90 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 MID1O15344 667 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 IL1BP01584 269 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 ZNF883P0CG24 379 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 C5AR1P21730 350 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 GRIA4P48058 902 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 PSMD8P48556 350 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 CDH4P55283 916 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 KRT83P78385 493 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 ZNF423Q2M1K9 1284 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 SLC25A52Q3SY17 297 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 ACCSLQ4AC99 568 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 KIAA0895LQ68EN5 471 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 NAXDQ8IW45 347 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 PGAP3Q96FM1 320 aaPredicted RBP19.36■□□□□ 0.69
CCDC78-204ENST00000439619 SPAG5Q96R06 1193 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 TKTL2Q9H0I9 626 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 MUC3BQ9H195 1237 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 PIGVQ9NUD9 493 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 ANO10Q9NW15 660 aa19.36■□□□□ 0.69
CCDC78-204ENST00000439619 A0A1B0GVT2 93 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 A0A1W2PP55 124 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 SH3BP5O60239 455 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 GJB3O75712 270 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 GOT1P17174 413 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 MZF1P28698 734 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-204ENST00000439619 CSNK1EP49674 416 aaKnown RBP19.35■□□□□ 0.69
CCDC78-204ENST00000439619 CXCR3P49682 368 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 CENPCQ03188 943 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 TRIP6Q15654 476 aaKnown RBP19.35■□□□□ 0.69
CCDC78-204ENST00000439619 HLA-BQ31612 363 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 FAM46CQ5VWP2 391 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 CXorf57Q6NSI4 855 aaKnown RBP19.35■□□□□ 0.69
CCDC78-204ENST00000439619 DPY19L2P1Q6NXN4 242 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 STK40Q8N2I9 435 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 OR2T34Q8NGX1 318 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 C1orf216Q8TAB5 229 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 SETD7Q8WTS6 366 aaKnown RBP19.35■□□□□ 0.69
CCDC78-204ENST00000439619 OR8D1Q8WZ84 308 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 IGSF8Q969P0 613 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 CCDC114Q96M63 670 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 PCMTD1Q96MG8 357 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-204ENST00000439619 FEM1AQ9BSK4 669 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 TM9SF3Q9HD45 589 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 TM7SF3Q9NS93 570 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 ARHGEF38Q9NXL2 777 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 ADAMTS1Q9UHI8 967 aa19.35■□□□□ 0.69
CCDC78-204ENST00000439619 FARP1Q9Y4F1 1045 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-204ENST00000439619 CNOT1A5YKK6 2376 aaKnown RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 CKAP5Q14008 2032 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 GOLGA8SH3BPF8 625 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 ZNF18P17022 549 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 STK19P49842 368 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 VASPP50552 380 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 GALCP54803 685 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 C21orf59P57076 290 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 KRT31Q15323 416 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 CDKAL1Q5VV42 579 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 NOP9Q86U38 636 aaKnown RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 XYLT1Q86Y38 959 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 EPS8L1Q8TE68 723 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 PTPRN2Q92932 1015 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 NT5C3BQ969T7 300 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 C2orf49Q9BVC5 232 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 ACE2Q9BYF1 805 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 ADAM33Q9BZ11 813 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 NEUROG2Q9H2A3 272 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 FAM207AQ9NSI2 230 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 ANKRD6Q9Y2G4 727 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 TBC1D30Q9Y2I9 924 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 PCDHGB2Q9Y5G2 931 aa19.34■□□□□ 0.69
CCDC78-204ENST00000439619 MUC22E2RYF6 1773 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-204ENST00000439619 C1QTNF3-AMACRE9PGA6 284 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 FLRT2O43155 660 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 DFNA5O60443 496 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 GFPT2O94808 682 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 RHOCP08134 193 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 MMEP08473 750 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 CDK11BP21127 795 aaKnown RBP19.33■□□□□ 0.68
CCDC78-204ENST00000439619 POLR2FP61218 127 aaKnown RBP19.33■□□□□ 0.68
CCDC78-204ENST00000439619 RACK1P63244 317 aaKnown RBP19.33■□□□□ 0.68
CCDC78-204ENST00000439619 SYCP1Q15431 976 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 C5orf22Q49AR2 442 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 C6orf118Q5T5N4 469 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 NAA35Q5VZE5 725 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 NCEH1Q6PIU2 408 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 TRIM72Q6ZMU5 477 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 ARCQ7LC44 396 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 SETD3Q86TU7 594 aaPredicted RBP19.33■□□□□ 0.68
CCDC78-204ENST00000439619 OR14C36Q8NHC7 312 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 CPA5Q8WXQ8 436 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 C1orf74Q96LT6 269 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 FAM129BQ96TA1 746 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 TBCBQ99426 244 aa19.33■□□□□ 0.68
CCDC78-204ENST00000439619 SCNM1Q9BWG6 230 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms