RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 LPIN1Q14693 890 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 PIGGQ5H8A4 983 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 BNC2Q6ZN30 1099 aaPredicted RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 ZBTB46Q86UZ6 589 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 MYO1HQ8N1T3 1032 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 RTP4Q96DX8 246 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 NUF2Q9BZD4 464 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 ANLNQ9NQW6 1124 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 BLOC1S6Q9UL45 172 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 B4GALT5O43286 388 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 ALOX15P16050 662 aaPredicted RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 LSM12Q3MHD2 195 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SLC9A4Q6AI14 798 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 LRRC71Q8N4P6 559 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 TRIML2Q8N7C3 387 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 KYQ8NBH2 561 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 ATP2A3Q93084 1043 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SLC10A4Q96EP9 437 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 LGMNQ99538 433 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SIKE1Q9BRV8 207 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 CNPY3Q9BT09 278 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 B3GNT5Q9BYG0 378 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 UNKQ9C0B0 810 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 PCDHAC1Q9H158 963 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 STN1Q9H668 368 aaKnown RBP13.86□□□□□ -0.19
PCNX3-202ENST00000439247 SIX4Q9UIU6 781 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 ADAMTS5Q9UNA0 930 aa13.86□□□□□ -0.19
PCNX3-202ENST00000439247 BCLAF3A2AJT9 711 aaKnown RBP13.85□□□□□ -0.19
PCNX3-202ENST00000439247 USP12O75317 370 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 OATP04181 439 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 SUPT20HL2P0C7V6 817 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 CXCL8P10145 99 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 CYP2F1P24903 491 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 NDST2P52849 883 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 NR1H2P55055 460 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 CNTN2Q02246 1040 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 HSP90AA5PQ58FG0 334 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 NXNQ6DKJ4 435 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 ITPRIPL1Q6GPH6 555 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 MCUQ8NE86 351 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 TSPAN14Q8NG11 270 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 FAM110BQ8TC76 370 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 ARNTL2Q8WYA1 636 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 AGAP2Q99490 1192 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 DCUN1D5Q9BTE7 237 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 GBA2Q9HCG7 927 aaPredicted RBP13.85□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF302Q9NR11 478 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 SNX15Q9NRS6 342 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 SYBUQ9NX95 663 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 DCDC2Q9UHG0 476 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 ARHGAP10A1A4S6 786 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 MSCO60682 206 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 GRK2P25098 689 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 PHKA2P46019 1235 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 PSMD7P51665 324 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 PPIL2Q13356 520 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 DBN1Q16643 649 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 FSCBQ5H9T9 825 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 SCUBE3Q8IX30 993 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 DCLK2Q8N568 766 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 RDM1Q8NG50 284 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
PCNX3-202ENST00000439247 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 COQ10BQ9H8M1 238 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 TIMMDC1Q9NPL8 285 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 EPS15L1Q9UBC2 864 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 CIDEBQ9UHD4 219 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 KCNH4Q9UQ05 1017 aa13.85□□□□□ -0.19
PCNX3-202ENST00000439247 GOLGA8TH3BQL2 631 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 MED7O43513 233 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 COQ9O75208 318 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 NFICP08651 508 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 SAT1P21673 171 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 GLDCP23378 1020 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 VARSP26640 1264 aaKnown RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 LPCAT2Q7L5N7 544 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 TMEM102Q8N9M5 508 aaPredicted RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 EME1Q96AY2 570 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 LRRC39Q96DD0 335 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 FAM49BQ9NUQ9 324 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 RSL24D1Q9UHA3 163 aaKnown RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 PCDHB12Q9Y5F1 795 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 CCDC78A2IDD5 438 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 BTBD19C9JJ37 291 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 PSMC3P17980 439 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 MAGEA6P43360 314 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 CCR3P51677 355 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 RPL26P61254 145 aaKnown RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 GHRHRQ02643 423 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 MGAT5BQ3V5L5 792 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF667Q5HYK9 610 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 EEF1DP3Q658K8 133 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 ZNF554Q86TJ5 538 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 PYROXD2Q8N2H3 581 aa13.84□□□□□ -0.19
PCNX3-202ENST00000439247 PCDH20Q8N6Y1 951 aaKnown RBP13.84□□□□□ -0.19
PCNX3-202ENST00000439247 LRTOMTQ8WZ04 291 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms