RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 GOLGA6L3A6NEY3 463 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 CYSRT1A8MQ03 144 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TBC1D3LB9A6J9 549 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 SIGLEC6O43699 453 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 STX10O60499 249 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 RNGTTO60942 597 aaKnown RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 FYNP06241 537 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TBC1D3HP0C7X1 549 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 VDRP11473 427 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 CKMT1AP12532 417 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 CMA1P23946 247 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 MZF1P28698 734 aaPredicted RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 CTSOP43234 321 aaPredicted RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 ME1P48163 572 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 LSSP48449 732 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 RPL34P49207 117 aaKnown RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 MXI1P50539 228 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 PLK1P53350 603 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TBX4P57082 545 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 PCBP4P57723 403 aaKnown RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 ERVPABLB-1P60509 514 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 PPP2CBP62714 309 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 PPP2CAP67775 309 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 CUL2Q13617 745 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 SLC12A1Q13621 1099 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 ELAVL3Q14576 367 aaKnown RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 EDRF1Q3B7T1 1238 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TBC1D3GQ6DHY5 549 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TBC1D3CQ6IPX1 549 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 PMF1Q6P1K2 205 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 BEND5Q7L4P6 421 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 PRPF39Q86UA1 669 aaKnown RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TBC1D3Q8IZP1 549 aaPredicted RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 SIX6OS1Q8N1H7 587 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 STK40Q8N2I9 435 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 FRS2Q8WU20 508 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TTC9Q92623 222 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 EEF2KMTQ96G04 330 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 FCRL2Q96LA5 508 aaPredicted RBP8.16□□□□□ -1.1
LINC00578-201ENST00000439009 HSFY1Q96LI6 401 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 DPH1Q9BZG8 443 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 KLHL11Q9NVR0 708 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 STIM2Q9P246 746 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 HPSEQ9Y251 543 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 TLR6Q9Y2C9 796 aa8.16□□□□□ -1.1
LINC00578-201ENST00000439009 SHROOM3Q8TF72 1996 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 UBR5O95071 2799 aaPredicted RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 FAM237AA0A1B0GTK4 181 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 B8ZZF3 427 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 PRAMEF26H0Y7S4 382 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 PLRG1O43660 514 aaKnown RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 OPA1O60313 960 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 FBXO21O94952 628 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 LUC7L3O95232 432 aaKnown RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 MOCS3O95396 460 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 IL1BP01584 269 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 LTFP02788 710 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 GP1BAP07359 652 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 PAEPP09466 180 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 GIMD1P0DJR0 217 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 C6P13671 934 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 DGKAP23743 735 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 PSMD8P48556 350 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 TMPRSS3P57727 454 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 YWHAEP62258 255 aaKnown RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 SKOR1P84550 965 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 SULT2A1Q06520 285 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 DPYDQ12882 1025 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 EIF4EBP2Q13542 120 aaPredicted RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 CDH18Q13634 790 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 STAT4Q14765 748 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 CNGA2Q16280 664 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 DCAF6Q58WW2 860 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 BROXQ5VW32 411 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 NEK5Q6P3R8 708 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 MMS22LQ6ZRQ5 1243 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 CCDC117Q8IWD4 279 aaPredicted RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 CARNMT1Q8N4J0 409 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 FAM181AQ8N9Y4 354 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 TMEM145Q8NBT3 493 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 OR4C6Q8NH72 309 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 UBA3Q8TBC4 463 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 TFAP2BQ92481 460 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 IFT43Q96FT9 208 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 SPAG5Q96R06 1193 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 LGMNQ99538 433 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 ZSWIM1Q9BR11 485 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
LINC00578-201ENST00000439009 POLR1BQ9H9Y6 1135 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 USP29Q9HBJ7 922 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 ASCL3Q9NQ33 180 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 CFAP45Q9UL16 551 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 PPM1HQ9ULR3 514 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 PCDHB1Q9Y5F3 818 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 ATP6V1DQ9Y5K8 247 aa8.15□□□□□ -1.1
LINC00578-201ENST00000439009 TMEM131Q92545 1883 aa8.15□□□□□ -1.11
LINC00578-201ENST00000439009 LY6G6EA0A0G2JKS1 128 aa8.14□□□□□ -1.11
LINC00578-201ENST00000439009 TYW5A2RUC4 315 aaKnown RBP8.14□□□□□ -1.11
LINC00578-201ENST00000439009 ALOX15BO15296 676 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms