RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 KDM1BQ8NB78 822 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 OR14C36Q8NHC7 312 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 TPCN2Q8NHX9 752 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 MAPK15Q8TD08 544 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 PLD4Q96BZ4 506 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 TMA16Q96EY4 203 aaKnown RBP11.59□□□□□ -0.55
CSTF3-203ENST00000438862 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 APOLD1Q96LR9 279 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 KDM4CQ9H3R0 1056 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 KCNK4Q9NYG8 393 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 HSPBP1Q9NZL4 362 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 MARCH2Q9P0N8 246 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
CSTF3-203ENST00000438862 STK17AQ9UEE5 414 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 SRPRBQ9Y5M8 271 aaKnown RBP11.59□□□□□ -0.55
CSTF3-203ENST00000438862 CLIC4Q9Y696 253 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 CREBBPQ92793 2442 aa11.59□□□□□ -0.55
CSTF3-203ENST00000438862 BSNQ9UPA5 3926 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 TLN1Q9Y490 2541 aaKnown RBP11.58□□□□□ -0.56
CSTF3-203ENST00000438862 USP9YO00507 2555 aaPredicted RBP11.58□□□□□ -0.56
CSTF3-203ENST00000438862 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 PHACTR2O75167 634 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 WFS1O76024 890 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 SLFN14P0C7P3 912 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 FAM87AP0C7U9 286 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 THEGLP0DJG4 465 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 C5AR1P21730 350 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 CCR10P46092 362 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 MMP16P51512 607 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 ADPRHP54922 357 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 EHHADHQ08426 723 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 LCE2CQ5TA81 110 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 SV2BQ7L1I2 683 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 UNC93AQ86WB7 457 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 MMAAQ8IVH4 418 aaKnown RBP11.58□□□□□ -0.56
CSTF3-203ENST00000438862 ZC3H3Q8IXZ2 948 aaKnown RBP11.58□□□□□ -0.56
CSTF3-203ENST00000438862 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 WDR36Q8NI36 951 aaKnown RBP11.58□□□□□ -0.56
CSTF3-203ENST00000438862 CCDC127Q96BQ5 260 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 KLHDC7BQ96G42 594 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 ATXN7L3BQ96GX2 97 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 DUSP23Q9BVJ7 150 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 SLC25A18Q9H1K4 315 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 KLHL11Q9NVR0 708 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 NLGN3Q9NZ94 848 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 ARHGAP20Q9P2F6 1191 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 CCDC39Q9UFE4 941 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 ENTPD2Q9Y5L3 495 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 USP3Q9Y6I4 520 aa11.58□□□□□ -0.56
CSTF3-203ENST00000438862 A0A1W2PNU3 283 aaPredicted RBP11.57□□□□□ -0.56
CSTF3-203ENST00000438862 SLC12A8A0AV02 714 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 TTC24A2A3L6 582 aaPredicted RBP11.57□□□□□ -0.56
CSTF3-203ENST00000438862 PRAMEF26H0Y7S4 382 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 FFAR2O15552 330 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 CUTAO60888 179 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 RNGTTO60942 597 aaKnown RBP11.57□□□□□ -0.56
CSTF3-203ENST00000438862 TNFSF15O95150 251 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 ASLP04424 464 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 GIMD1P0DJR0 217 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 P4HA1P13674 534 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 IDEP14735 1019 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 TGM2P21980 687 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 ADORA2BP29275 332 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 TRIP4Q15650 581 aaPredicted RBP11.57□□□□□ -0.56
CSTF3-203ENST00000438862 ZNF699Q32M78 642 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 ADGRF1Q5T601 910 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 C9orf64Q5T6V5 341 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 C12orf29Q8N999 325 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 IFI44Q8TCB0 444 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 JAKMIP2Q96AA8 810 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 TTC17Q96AE7 1141 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 MYO19Q96H55 970 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 MTG2Q9H4K7 406 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 LRRC4CQ9HCJ2 640 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 FAM49BQ9NUQ9 324 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 UCKL1Q9NWZ5 548 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 GEMIN8Q9NWZ8 242 aaKnown RBP11.57□□□□□ -0.56
CSTF3-203ENST00000438862 NCKIPSDQ9NZQ3 722 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 STOML2Q9UJZ1 356 aa11.57□□□□□ -0.56
CSTF3-203ENST00000438862 A0A1W2PQ27 194 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 A0A1W2PQ64 194 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 FRMD3A2A2Y4 597 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 TCEA3O75764 348 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 LATS1O95835 1130 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 ITGA2BP08514 1039 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 PTMSP20962 102 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 NDST1P52848 882 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 AP3M2P53677 418 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 PPP2CBP62714 309 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 PPP2CAP67775 309 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 CEBPZQ03701 1054 aaKnown RBP11.56□□□□□ -0.56
CSTF3-203ENST00000438862 CYP24A1Q07973 514 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 KCNMA1Q12791 1236 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
CSTF3-203ENST00000438862 MPP7Q5T2T1 576 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 FOXR1Q6PIV2 292 aa11.56□□□□□ -0.56
CSTF3-203ENST00000438862 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
CSTF3-203ENST00000438862 RBM44Q6ZP01 1051 aaKnown RBP11.56□□□□□ -0.56
CSTF3-203ENST00000438862 RSRC2Q7L4I2 434 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms