RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 CFAP58Q5T655 872 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 KAZNQ674X7 775 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 KLHDC10Q6PID8 442 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 DENND5BQ6ZUT9 1274 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 TRMT10CQ7L0Y3 403 aaKnown RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 PCGF5Q86SE9 256 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 TAC4Q86UU9 113 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 HOOK3Q86VS8 718 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 FAM131BQ86XD5 332 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 GSPT2Q8IYD1 628 aaKnown RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 COLGALT1Q8NBJ5 622 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ATAD1Q8NBU5 361 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SCAMP5Q8TAC9 235 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ZNF461Q8TAF7 563 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SLC7A14Q8TBB6 771 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 PHOSPHO2Q8TCD6 241 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 RNF139Q8WU17 664 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 P3H4Q92791 437 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ACSF2Q96CM8 615 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 HAUS1Q96CS2 278 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SLC39A13Q96H72 371 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 C1orf74Q96LT6 269 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 MYRFLQ96LU7 910 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SERPINB11Q96P15 392 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 CDK5RAP1Q96SZ6 601 aaKnown RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 TMEM109Q9BVC6 243 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 MUC3BQ9H195 1237 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ADAM7Q9H2U9 754 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 DHX35Q9H5Z1 703 aaKnown RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 RETREG1Q9H6L5 497 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 USP29Q9HBJ7 922 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 RXFP1Q9HBX9 757 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ARHGEF4Q9NR80 690 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.89□□□□□ -1.152e-7■■□□□ 12.4
HMGB2-202ENST00000438704 OLA1Q9NTK5 396 aaKnown RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 DDIT4Q9NX09 232 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ABI2Q9NYB9 513 aaPredicted RBP7.89□□□□□ -1.15
HMGB2-202ENST00000438704 SPG21Q9NZD8 308 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ASIC3Q9UHC3 531 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 ZNF148Q9UQR1 794 aa7.89□□□□□ -1.15
HMGB2-202ENST00000438704 GREB1Q4ZG55 1949 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 WDR27A2RRH5 827 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 WASH4PA8MWX3 477 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 H0YGN5 161 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 I6L893 689 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 AGPSO00116 658 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 EIF3HO15372 352 aaKnown RBP eCLIP7.88□□□□□ -1.155e-6■□□□□ 8.9
HMGB2-202ENST00000438704 NCAM2O15394 837 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 GJB5O95377 273 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 IGLV3-27P01718 113 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 RBP3P10745 1247 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 YWHAQP27348 245 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 ADCY8P40145 1251 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 TNNT3P45378 269 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 PPP3CCP48454 512 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 GLUD2P49448 558 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 TUBP50607 506 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 KPNA1P52294 538 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 ATXN1P54253 815 aaKnown RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 PLTPP55058 493 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 EIF3BP55884 814 aaKnown RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 EIF3EP60228 445 aaKnown RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 ROR1Q01973 937 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 RING1Q06587 406 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 LLGL1Q15334 1064 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 UAP1Q16222 522 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 P3H1Q32P28 736 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 SLC45A4Q5BKX6 768 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 COX20Q5RI15 118 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 RNASEH2BQ5TBB1 312 aaKnown RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 MANEALQ5VSG8 457 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 BTBD8Q5XKL5 378 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 NCBP2-AS2Q69YL0 99 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 PSRC1Q6PGN9 363 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 RFX8Q6ZV50 586 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 PDZD4Q76G19 769 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 C16orf59Q7L2K0 433 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 TAS1R1Q7RTX1 841 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 CROCCP2Q86T23 111 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 CEP57Q86XR8 500 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 KRTAP1-3Q8IUG1 177 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 CDKL3Q8IVW4 592 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 ZCCHC9Q8N567 271 aaKnown RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 PDZD8Q8NEN9 1154 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 HERVK_113Q902F9 699 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 TRMT2BQ96GJ1 504 aaKnown RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 TMEM169Q96HH4 297 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 CCDC114Q96M63 670 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 QKIQ96PU8 341 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 CLSTN3Q9BQT9 956 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 TMEM121Q9BTD3 319 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 FRMD8Q9BZ67 464 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 DPH5Q9H2P9 285 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 EPB41L4BQ9H329 900 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 PABPC3Q9H361 631 aaKnown RBP7.88□□□□□ -1.15
HMGB2-202ENST00000438704 WDCPQ9H6R7 721 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 FAM204AQ9H8W3 233 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 GPATCH2LQ9NWQ4 482 aa7.88□□□□□ -1.15
HMGB2-202ENST00000438704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms