RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PLIN3O60664 434 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 SIN3BO75182 1162 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 HMBSP08397 361 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ERCC2P18074 760 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ARF4P18085 180 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 EPHA3P29320 983 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ICAM3P32942 547 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ETFBP38117 255 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MATKP42679 507 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 GRIA4P48058 902 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PPIDQ08752 370 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 KLF10Q13118 480 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TSTA3Q13630 321 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MAPRE1Q15691 268 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 SAMD4BQ5PRF9 694 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TBCELQ5QJ74 424 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 KIAA1841Q6NSI8 718 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 LRRC8BQ6P9F7 803 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CYP2R1Q6VVX0 501 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 B3GNT6Q6ZMB0 384 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 DHFR2Q86XF0 187 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PQLC1Q8N2U9 271 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PCDH20Q8N6Y1 951 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF555Q8NEP9 628 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 BLOC1S5Q8TDH9 187 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 SNRNP27Q8WVK2 155 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 SLC25A23Q9BV35 468 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 STRA6Q9BX79 667 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ULBP1Q9BZM6 244 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ETAA1Q9NY74 926 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 COPG2Q9UBF2 871 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PRKAG3Q9UGI9 489 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 LRRC42Q9Y546 428 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ADGRA2Q96PE1 1338 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF541Q9H0D2 1346 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 FAM95CA0A1B0GW59 222 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 SAC3D1A6NKF1 404 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 SOAT2O75908 522 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CABYRO75952 493 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TMCC1O94876 653 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 C2P06681 752 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PIK3R1P27986 724 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF135P52742 658 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 NRLP54845 237 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 FOLH1Q04609 750 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 GAD2Q05329 585 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MSS51Q4VC12 460 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 UBAP2Q5T6F2 1119 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TRMT10BQ6PF06 316 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 HPS6Q86YV9 775 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 FBXW8Q8N3Y1 598 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 DIS3LQ8TF46 1054 aaKnown RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 RCN3Q96D15 328 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MCRS1Q96EZ8 462 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 VPS50Q96JG6 964 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CDH19Q9H159 772 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 COG4Q9H9E3 785 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 RNF19AQ9NV58 838 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 NDFIP2Q9NV92 336 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 HACD3Q9P035 362 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 LRFN2Q9ULH4 789 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PSMD13Q9UNM6 376 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MYRFQ9Y2G1 1151 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 GPR25O00155 361 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PSMD12O00232 456 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CXCL11O14625 94 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 LTFP02788 710 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CSH1P0DML2 217 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CSH2P0DML3 217 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 SLC2A3P11169 496 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ODC1P11926 461 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF23P17027 643 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 NFKB1P19838 968 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 FASP25445 335 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 YY1P25490 414 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 NFKBIAP25963 317 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PLK1P53350 603 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 MOGSQ13724 837 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 NFYCQ13952 458 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 LIN52Q52LA3 116 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TMTC4Q5T4D3 741 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ANO7Q6IWH7 933 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 STRADAQ7RTN6 431 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PTAR1Q7Z6K3 402 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 NETO2Q8NC67 525 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 RTKNQ9BST9 563 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 ASPSCR1Q9BZE9 553 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CDHR5Q9HBB8 845 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TBC1D13Q9NVG8 400 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 CD274Q9NZQ7 290 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 HES2Q9Y543 173 aa6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TIMM13Q9Y5L4 95 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-205ENST00000438362 TRAFD1O14545 582 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-205ENST00000438362 TBC1D4O60343 1298 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 GCATO75600 419 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 THP07101 528 aa6.8□□□□□ -1.32
CSDE1-205ENST00000438362 ETS2P15036 469 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms