RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CCDC187A0A096LP49 1063 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 MAGEC1O60732 1142 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 ATP5BP06576 529 aaKnown RBP12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 ALPPL2P10696 532 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 HGFP14210 728 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 COL8A1P27658 744 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 OVGP1Q12889 678 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 MORC3Q14149 939 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 HNRNPA1L2Q32P51 320 aaKnown RBP12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 MPPE1Q53F39 396 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 PERM1Q5SV97 790 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 WDR49Q8IV35 697 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 SYCP3Q8IZU3 236 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 C12orf29Q8N999 325 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 FAM174AQ8TBP5 190 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 MRGPRX3Q96LB0 322 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 ZNF768Q9H5H4 540 aaKnown RBP12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 FAM49BQ9NUQ9 324 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 HMGXB4Q9UGU5 601 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 RP1P56715 2156 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 CRYBG3Q68DQ2 2970 aa12.78□□□□□ -0.36
SMAD9-IT1-201ENST00000437983 SLC12A8A0AV02 714 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 A1L4Q6 167 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TTC34A8MYJ7 566 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SCAMP1O15126 338 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 GCNT3O95395 438 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 POLR2EP19388 210 aaKnown RBP12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ADORA2BP29275 332 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DRD3P35462 400 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 HARS2P49590 506 aaKnown RBP12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 KCNAB2Q13303 367 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ELOAQ14241 798 aaKnown RBP12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MANEAQ5SRI9 462 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SCARA5Q6ZMJ2 495 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MIB2Q96AX9 1013 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SPSB2Q99619 263 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 OCSTAMPQ9BR26 566 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ADNPQ9H2P0 1102 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZNF71Q9NQZ8 489 aaPredicted RBP12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ANAPC2Q9UJX6 822 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PCDHGA7Q9Y5G6 932 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 LRRK1Q38SD2 2015 aa12.77□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZNF233A6NK53 670 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PLD2O14939 933 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MTSS1O43312 755 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DLATP10515 647 aaKnown RBP12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 LIPCP11150 499 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TNFRSF8P28908 595 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 UGT1A5P35504 534 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MMP16P51512 607 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 POLE2P56282 527 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 B3GNT8Q7Z7M8 397 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 STK40Q8N2I9 435 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZNF276Q8N554 614 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 OR13H1Q8NG92 308 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TMA16Q96EY4 203 aaKnown RBP12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CALML4Q96GE6 196 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TNIP3Q96KP6 325 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NOX5Q96PH1 765 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 USP29Q9HBJ7 922 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TMPRSS4Q9NRS4 437 aa12.76□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 EME2A4GXA9 379 aaPredicted RBP12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PRAMEF26H0Y7S4 382 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 AGRPO00253 132 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 AGFG2O95081 481 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 FAM200BP0CF97 657 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 RALAP11233 206 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TNNI1P19237 187 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 C5AR1P21730 350 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ELAVL4P26378 380 aaKnown RBP12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CTSOP43234 321 aaPredicted RBP12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 UQCRFS1P47985 274 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 KIF11P52732 1056 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SURF1Q15526 300 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TADA2BQ86TJ2 420 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZFAND4Q86XD8 727 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SRRM1Q8IYB3 904 aaKnown RBP12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SLC22A18ASQ8N1D0 253 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 FBXO39Q8N4B4 442 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TMEM145Q8NBT3 493 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SPATA20Q8TB22 786 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 LARP4BQ92615 738 aaKnown RBP12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 KLK6Q92876 244 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 LMLNQ96KR4 655 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CALN1Q9BXU9 219 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CLIC5Q9NZA1 410 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MARCH2Q9P0N8 246 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ACSL6Q9UKU0 697 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms