RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 LRRTM3Q86VH5 581 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 SPATA6LQ8N4H0 392 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 GSDMBQ8TAX9 411 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 DENND2DQ9H6A0 471 aaPredicted RBP9.71□□□□□ -0.85
CUX1-206ENST00000437600 CHRAC1Q9NRG0 131 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 SLC38A7Q9NVC3 462 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 KLHL8Q9P2G9 620 aaPredicted RBP9.71□□□□□ -0.85
CUX1-206ENST00000437600 PHF24Q9UPV7 400 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 USP3Q9Y6I4 520 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 RALGAPA2Q2PPJ7 1873 aa9.71□□□□□ -0.85
CUX1-206ENST00000437600 GABRDO14764 452 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 TPP1O14773 563 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 TM9SF1O15321 606 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 ZBTB24O43167 697 aaPredicted RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 ENO1P06733 434 aaKnown RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 WARSP23381 471 aaKnown RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 CYP2C18P33260 490 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 GCKP35557 465 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 SLC8A3P57103 927 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 TLE2Q04725 743 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 KHDC1Q4VXA5 237 aaKnown RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 TMCO2Q7Z6W1 182 aaPredicted RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 CDKL3Q8IVW4 592 aaPredicted RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 FAM126BQ8IXS8 530 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 EFCAB3Q8N7B9 438 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 OR10T2Q8NGX3 314 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 PPP1R14CQ8TAE6 165 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 GPR152Q8TDT2 470 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 MYLPFQ96A32 169 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 E2F7Q96AV8 911 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 CCDC97Q96F63 343 aaPredicted RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 HNRNPABQ99729 332 aaKnown RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 RTP3Q9BQQ7 232 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 CPSF2Q9P2I0 782 aaKnown RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 PPARGC1AQ9UBK2 798 aaKnown RBP9.71□□□□□ -0.86
CUX1-206ENST00000437600 DNAJB4Q9UDY4 337 aa9.71□□□□□ -0.86
CUX1-206ENST00000437600 A0A0A0MRY4 1105 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 C2CD2LO14523 706 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 DCTN3O75935 186 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 DDHD2O94830 711 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 SETSIPP0DME0 302 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 CD1EP15812 388 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 ADRA1BP35368 520 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 PEX19P40855 299 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 PEX6Q13608 980 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 TCTN1Q2MV58 587 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 HSP90AA5PQ58FG0 334 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 TRIM68Q6AZZ1 485 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 OTOP3Q7RTS5 596 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 PLD6Q8N2A8 252 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 SPATA22Q8NHS9 363 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 SPATA13Q96N96 652 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 FAM167BQ9BTA0 163 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 CADM1Q9BY67 442 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 OXCT2Q9BYC2 517 aaPredicted RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 TKTL2Q9H0I9 626 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 SFMBT1Q9UHJ3 866 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 GIT1Q9Y2X7 761 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 PDCD11Q14690 1871 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 TRANK1O15050 2925 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 SDR42E2A6NKP2 422 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 NT5C1B-RDH14C9J2C7 533 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 XPO1O14980 1071 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 MSI1O43347 362 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 DGKIO75912 1065 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 CABYRO75952 493 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 JCHAINP01591 159 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 DHRS4L1P0CG22 281 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 PRKCHP24723 683 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 NOS2P35228 1153 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 OR1G1P47890 313 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 IRX1P78414 480 aaPredicted RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 UBAP2LQ14157 1087 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 N4BP2L1Q5TBK1 243 aaPredicted RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 TREML1Q86YW5 311 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 STK32AQ8WU08 396 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 LINC01599Q8WXQ3 324 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 RTP4Q96DX8 246 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 HSFY1Q96LI6 401 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 NPY6RQ99463 290 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 MAN1C1Q9NR34 630 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 CHST12Q9NRB3 414 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 OR12D3Q9UGF7 316 aa9.7□□□□□ -0.86
CUX1-206ENST00000437600 G3BP2Q9UN86 482 aaKnown RBP9.7□□□□□ -0.86
CUX1-206ENST00000437600 TTC24A2A3L6 582 aaPredicted RBP9.69□□□□□ -0.86
CUX1-206ENST00000437600 FCHO1O14526 889 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 NBNO60934 754 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 KRT38O76015 456 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 MOCS2O96007 188 aaPredicted RBP9.69□□□□□ -0.86
CUX1-206ENST00000437600 MT-CYBP00156 380 aaPredicted RBP9.69□□□□□ -0.86
CUX1-206ENST00000437600 SLC18A1P54219 525 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 ZBTB17Q13105 803 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 PDE1CQ14123 709 aaPredicted RBP9.69□□□□□ -0.86
CUX1-206ENST00000437600 GPNMBQ14956 572 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 RGS9BPQ6ZS82 235 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 LIMS2Q7Z4I7 341 aa9.69□□□□□ -0.86
CUX1-206ENST00000437600 POU5F2Q8N7G0 328 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms