RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NME5P56597 212 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 HECTD3Q5T447 861 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 GPR142Q7Z601 462 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 ZCCHC9Q8N567 271 aaKnown RBP16.15■□□□□ 0.18
PTPN13-204ENST00000436978 ANKRD49Q8WVL7 239 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 WNT8BQ93098 351 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 ENTPD4Q9Y227 616 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 FYNP06241 537 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 CYP2A13Q16696 494 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 FBXW10Q5XX13 1052 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 DEFB106AQ8N104 65 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 CXorf40AQ8TE69 158 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 ZDHHC6Q9H6R6 413 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF112Q9UJU3 913 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 FAM50BQ9Y247 325 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 MAGEA13PA6NCF6 341 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 GPSM1Q86YR5 675 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 SLC40A1Q9NP59 571 aa16.15■□□□□ 0.18
PTPN13-204ENST00000436978 PMS1P54277 932 aaKnown RBP16.14■□□□□ 0.18
PTPN13-204ENST00000436978 MSLNQ13421 630 aaPredicted RBP16.14■□□□□ 0.18
PTPN13-204ENST00000436978 PARP6Q2NL67 630 aa16.14■□□□□ 0.18
PTPN13-204ENST00000436978 FAM45BPQ6NSW5 357 aa16.14■□□□□ 0.18
PTPN13-204ENST00000436978 PPTC7Q8NI37 304 aa16.14■□□□□ 0.18
PTPN13-204ENST00000436978 VMP1Q96GC9 406 aa16.14■□□□□ 0.18
PTPN13-204ENST00000436978 BBS4Q96RK4 519 aa16.14■□□□□ 0.18
PTPN13-204ENST00000436978 ATP13A3Q9H7F0 1226 aa16.14■□□□□ 0.18
PTPN13-204ENST00000436978 MORF4L1Q9UBU8 362 aa16.14■□□□□ 0.18
PTPN13-204ENST00000436978 XPO1O14980 1071 aaKnown RBP16.14■□□□□ 0.17
PTPN13-204ENST00000436978 KLHL41O60662 606 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 BEX3Q00994 111 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 TRAPPC12Q8WVT3 735 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 CLTBP09497 229 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 BGNP21810 368 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 ELK3P41970 407 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 RAD23AP54725 363 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 TRAF2Q12933 501 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 AGKQ53H12 422 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 CES1P23141 567 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 SMARCB1Q12824 385 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 C1orf186Q6ZWK4 172 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 STMN3Q9NZ72 180 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 HAO1Q9UJM8 370 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 E5RJQ4 531 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 HNRNPCP07910 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTPN13-204ENST00000436978 MIPP30301 263 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 TMEM26Q6ZUK4 368 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 LRRC49Q8IUZ0 686 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 SH3BP4Q9P0V3 963 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 SGTAO43765 313 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 SP3Q02447 781 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 MILR1Q7Z6M3 343 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 UGT2B28Q9BY64 529 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 MID1IP1Q9NPA3 183 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 CCDC189A1A4V9 331 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 FKTNO75072 461 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 C4BPBP20851 252 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 CXCR2P25025 360 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 MAP2K5Q13163 448 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 USP41Q3LFD5 358 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 MYCBPAPQ8TBZ2 947 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 BBS2Q9BXC9 721 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 OXCT2Q9BYC2 517 aaPredicted RBP16.14■□□□□ 0.17
PTPN13-204ENST00000436978 MMADHCQ9H3L0 296 aaPredicted RBP16.14■□□□□ 0.17
PTPN13-204ENST00000436978 OPTCQ9UBM4 332 aa16.14■□□□□ 0.17
PTPN13-204ENST00000436978 MED1Q15648 1581 aaPredicted RBP16.14■□□□□ 0.17
PTPN13-204ENST00000436978 PDZK1P1A8MUH7 402 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 CRYMQ14894 314 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 CEP78Q5JTW2 689 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 VGLL2Q8N8G2 317 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 MTMR9Q96QG7 549 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 IGFLR1Q9H665 355 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 DCLRE1BQ9H816 532 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 C2CD2Q9Y426 696 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 SNX13Q9Y5W8 968 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 AMPD1P23109 780 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 THOP1P52888 689 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 IL2P60568 153 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 GRIK3Q13003 919 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 SH3GL3Q99963 347 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 SAC3D1A6NKF1 404 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 E7ENQ6 273 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 CNOT3O75175 753 aaKnown RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 CRYBB1P53674 252 aaPredicted RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 XRCC4Q13426 336 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 NOMO2Q5JPE7 1267 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 NDUFA13Q9P0J0 144 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 CORO2BQ9UQ03 480 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 DERAQ9Y315 318 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 NDUFAF1Q9Y375 327 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 CHKAP35790 457 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 TRIM71Q2Q1W2 868 aaKnown RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ZFP1Q6P2D0 407 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 ATL1Q8WXF7 558 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 OSBPL6Q9BZF3 934 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 CLUHO75153 1309 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 MAFO75444 373 aaPredicted RBP16.13■□□□□ 0.17
PTPN13-204ENST00000436978 NOS3P29474 1203 aa16.13■□□□□ 0.17
PTPN13-204ENST00000436978 TCEA2Q15560 299 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms