RNA–Protein interactions for RNA: ENST00000435331.3

HCG2040054-201, humanhuman

TSL 3 BASIC

Gene HCG2040054, Length 434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG2040054-201ENST00000435331 TMEM109Q9BVC6 243 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 SLC39A8Q9C0K1 460 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 NACA2Q9H009 215 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 SIK2Q9H0K1 926 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 PRDM12Q9H4Q4 367 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 EIF2B3Q9NR50 452 aaKnown RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 TMPRSS4Q9NRS4 437 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 ETNK2Q9NVF9 386 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 FAM53CQ9NYF3 392 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 SMARCAL1Q9NZC9 954 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 GRHL1Q9NZI5 618 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 KIAA1522Q9P206 1035 aaPredicted RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 SAE1Q9UBE0 346 aaPredicted RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 IPO11Q9UI26 975 aaKnown RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 XPO7Q9UIA9 1087 aaKnown RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 LSM7Q9UK45 103 aaKnown RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 NUDT5Q9UKK9 219 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 SLC27A6Q9Y2P4 619 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 ATP8A1Q9Y2Q0 1164 aa4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 MRPS23Q9Y3D9 190 aaKnown RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 FARP1Q9Y4F1 1045 aaPredicted RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 ARIH1Q9Y4X5 557 aaPredicted RBP4.17□□□□□ -1.74
HCG2040054-201ENST00000435331 COL4A4P53420 1690 aaPredicted RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 UQCRHLA0A096LP55 91 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GOLGA6L7A0A1B0GV03 622 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 A0A1B0GVM2 712 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 LOC285095A0A1B0GVY8 99 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 TCAF2A6NFQ2 919 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 RASA4BC9J798 803 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ANHXE9PGG2 379 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 H7C0C1 242 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 DNALI1O14645 258 aaPredicted RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CHADO15335 359 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MSI1O43347 362 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 RASA4O43374 803 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 PRAMEF11O60813 436 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 RAMP2O60895 175 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ECI2O75521 394 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 FAM155BO75949 473 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CNTN5O94779 1100 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 STK10O94804 968 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CD160O95971 181 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 UQCRHP07919 91 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GSTA2P09210 222 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 RHOXF2BP0C7M4 288 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MBL2P11226 248 aaPredicted RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MYL4P12829 197 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CCNB1P14635 433 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GLULP15104 373 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 FSHRP23945 695 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 PTPN3P26045 913 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 RBL1P28749 1068 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 OR1E1P30953 314 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CORO1AP31146 461 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 SLC6A4P31645 630 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ACTN2P35609 894 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 AVPR1AP37288 418 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 HSPA9P38646 679 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MTHFRP42898 656 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MAGEA3P43357 314 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MMP13P45452 471 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 RPL21P46778 160 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ATP5OP48047 213 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 NPY2RP49146 381 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CARSP49589 748 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 DNA2P51530 1060 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CDR1P51861 262 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GEMIN4P57678 1058 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 VSNL1P62760 191 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 SARNPP82979 210 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 SLC7A5Q01650 507 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GNA12Q03113 381 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 SULT2A1Q06520 285 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 C2orf54Q08AI8 447 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MSLNQ13421 630 aaPredicted RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 SEMA5AQ13591 1074 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 SNX1Q13596 522 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GRIN2CQ14957 1233 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 PDGFRLQ15198 375 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 E2F5Q15329 346 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 TEAD2Q15562 447 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 TRADDQ15628 312 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ZNF77Q15935 545 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ANO4Q32M45 955 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 PUS10Q3MIT2 529 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MAP9Q49MG5 647 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 TCEAL5Q5H9L2 206 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ANKRD20A2Q5SQ80 823 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GPR158Q5T848 1215 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 RNASEH2BQ5TBB1 312 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ANKRD20A1Q5TYW2 823 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 MARC1Q5VT66 337 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ANKRD20A3Q5VUR7 823 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 CES5AQ6NT32 575 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 ZNF449Q6P9G9 518 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 C1orf228Q6PIY5 440 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 PPP1R21Q6ZMI0 780 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 TRMT10CQ7L0Y3 403 aaKnown RBP4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 GSTA5Q7RTV2 222 aa4.16□□□□□ -1.74
HCG2040054-201ENST00000435331 PID1Q7Z2X4 250 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms