RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SCN3AQ9NY46 2000 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 A0A087X0B3 334 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PI4K2BG5E9Z4 385 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PITPNM1O00562 1244 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 BAIAP3O94812 1187 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PRKCHP24723 683 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 HRH2P25021 359 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RPL14P50914 215 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 FCGRTP55899 365 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 FMO1Q01740 532 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 KCNC3Q14003 757 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 IPMKQ8NFU5 416 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 DEPDC1BQ8WUY9 529 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RIN2Q8WYP3 895 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PCBD2Q9H0N5 130 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 COPG2Q9UBF2 871 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 STUB1Q9UNE7 303 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 NOVA2Q9UNW9 492 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 MAGEA13PA6NCF6 341 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 KCNJ13O60928 360 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 DUSP11O75319 330 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RECQL5O94762 991 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CCNCP24863 283 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PBX3P40426 434 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CCNFP41002 786 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 HNRNPDQ14103 355 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SPIDRQ14159 915 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 UBE2SQ16763 222 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ARSHQ5FYA8 562 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 UBE2R2Q712K3 238 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RBM15BQ8NDT2 890 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 BHLHE22Q8NFJ8 381 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 OSBPL11Q9BXB4 747 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RMND5AQ9H871 391 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TBC1D14Q9P2M4 693 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 UBA2Q9UBT2 640 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SNX3O60493 162 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 EDF1O60869 148 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SUPT3HO75486 399 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 THP07101 528 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 AUHQ13825 339 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 LBRQ14739 615 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 BTBD8Q5XKL5 378 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SPOPLQ6IQ16 392 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CASC4Q6P4E1 433 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 KDELC2Q7Z4H8 507 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 EGFL6Q8IUX8 553 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 HERC6Q8IVU3 1022 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF420Q8TAQ5 688 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 C15orf40Q8WUR7 153 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 THAP2Q9H0W7 228 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SMOC2Q9H3U7 446 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ELAC1Q9H777 363 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SIX2Q9NPC8 291 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 DPP3Q9NY33 737 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM216Q9P0N5 145 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CNTN3Q9P232 1028 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TJP2Q9UDY2 1190 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF638Q14966 1978 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 LRRC37A2A6NM11 1700 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CYP26A1O43174 497 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 LGALS2P05162 132 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 HSD3B1P14060 373 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 HSD3B2P26439 372 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RPL5P46777 297 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CTCFP49711 727 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 GMPSP49915 693 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 C2orf54Q08AI8 447 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TUSC3Q13454 348 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SQLEQ14534 574 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 GPR33Q49SQ1 333 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 KRT80Q6KB66 452 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SWSAP1Q6NVH7 229 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CBWD2Q8IUF1 395 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CMASQ8NFW8 434 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF384Q8TF68 577 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF75CPQ92670 426 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RTKNQ9BST9 563 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RAB11FIP5Q9BXF6 653 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 GBA2Q9HCG7 927 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PPANQ9NQ55 473 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 GIN1Q9NXP7 522 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TBK1Q9UHD2 729 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CST8O60676 142 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ATP6V1C1P21283 382 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TARBP2Q15633 366 aaKnown RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 MPP7Q5T2T1 576 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TOR1AIP2Q8NFQ8 470 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 ZFP28Q8NHY6 868 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 CENPIQ92674 756 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 HDAC11Q96DB2 347 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 RANBP9Q96S59 729 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 HOPXQ9BPY8 73 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 MTG1Q9BT17 334 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 FAM126AQ9BYI3 521 aaPredicted RBP3.84□□□□□ -1.79
SHPRH-205ENST00000433355 TXLNGYQ9BZA5 131 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 GPR88Q9GZN0 384 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 SIAEQ9HAT2 523 aa3.84□□□□□ -1.79
SHPRH-205ENST00000433355 PDLIM7Q9NR12 457 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms