RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 TYRP14679 529 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 CLCN1P35523 988 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 EIF4A3P38919 411 aaKnown RBP10.49□□□□□ -0.73
ATG4B-212ENST00000430617 PNPLA4P41247 253 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 KIF11P52732 1056 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 PSMC1P62191 440 aaKnown RBP10.49□□□□□ -0.73
ATG4B-212ENST00000430617 PTK2Q05397 1052 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 KLHL30Q0D2K2 578 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 INCA1Q0VD86 236 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 TSR1Q2NL82 804 aaKnown RBP10.49□□□□□ -0.73
ATG4B-212ENST00000430617 LINC00303Q3SY05 128 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 TDRD12Q587J7 1177 aaKnown RBP10.49□□□□□ -0.73
ATG4B-212ENST00000430617 ZNF571Q7Z3V5 609 aaPredicted RBP10.49□□□□□ -0.73
ATG4B-212ENST00000430617 LIMS2Q7Z4I7 341 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 DDX42Q86XP3 938 aaKnown RBP eCLIP10.49□□□□□ -0.73
ATG4B-212ENST00000430617 CCDC170Q8IYT3 715 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 CACTIN-AS1Q8N1I8 211 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 PRCCQ92733 491 aaPredicted RBP10.49□□□□□ -0.73
ATG4B-212ENST00000430617 MYLPFQ96A32 169 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 DESI2Q9BSY9 194 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 BBS2Q9BXC9 721 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 HAUS4Q9H6D7 363 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 CRTAC1Q9NQ79 661 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 CISHQ9NSE2 258 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 STARD5Q9NSY2 213 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 TMEM30AQ9NV96 361 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 ATP8B3O60423 1300 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 RP1P56715 2156 aa10.49□□□□□ -0.73
ATG4B-212ENST00000430617 SCN8AQ9UQD0 1980 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 CLEC18AA5D8T8 446 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 EIF3CLB5ME19 914 aaKnown RBP10.48□□□□□ -0.73
ATG4B-212ENST00000430617 GABRDO14764 452 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 GREM1O60565 184 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 NDUFA10O95299 355 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 WNT1P04628 370 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ITGAVP06756 1048 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 IRF1P10914 325 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ITGB6P18564 788 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 LMO2P25791 158 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 CCR10P46092 362 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 PPP3CCP48454 512 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 CACNA2D1P54289 1103 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ARID5AQ03989 594 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ENPP2Q13822 863 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 STARD3Q14849 445 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 WDR72Q3MJ13 1102 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 CLEC18BQ6UXF7 455 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 TPGS1Q6ZTW0 290 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 NOP9Q86U38 636 aaKnown RBP10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ADGRF2Q8IZF7 708 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 C17orf53Q8N3J3 647 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-212ENST00000430617 RBBP8NLQ8NC74 664 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-212ENST00000430617 CLEC18CQ8NCF0 446 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ACRBPQ8NEB7 543 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 SLC20A1Q8WUM9 679 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ELF4Q99607 663 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-212ENST00000430617 EIF3CQ99613 913 aaKnown RBP10.48□□□□□ -0.73
ATG4B-212ENST00000430617 DPH1Q9BZG8 443 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 PCED1AQ9H1Q7 454 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 CYP3A43Q9HB55 503 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ASCL3Q9NQ33 180 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 SPTLC3Q9NUV7 552 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 GDAP2Q9NXN4 497 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 HMGXB4Q9UGU5 601 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 SH3BP1Q9Y3L3 701 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
ATG4B-212ENST00000430617 BZW2Q9Y6E2 419 aaKnown RBP10.48□□□□□ -0.73
ATG4B-212ENST00000430617 ITPR3Q14573 2671 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 SPENQ96T58 3664 aaKnown RBP10.47□□□□□ -0.73
ATG4B-212ENST00000430617 A0A087X0T9 212 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 ENO4A6NNW6 628 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 USP27XA6NNY8 438 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 ESPNB1AK53 854 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 F8VP50 259 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 DDX3XO00571 662 aaKnown RBP eCLIP10.47□□□□□ -0.732e-7■■□□□ 13.3
ATG4B-212ENST00000430617 CYP26A1O43174 497 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 DFNA5O60443 496 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 TSPAN3O60637 253 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 HUS1O60921 280 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
ATG4B-212ENST00000430617 FSBPO95073 299 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 MT-CO3P00414 261 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 CCDC172P0C7W6 258 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 FAM228BP0C875 321 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 ACADMP11310 421 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 KRT5P13647 590 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 P4HA1P13674 534 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 CYP11B1P15538 503 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 CHRNB2P17787 502 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 CD58P19256 250 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 ABCB4P21439 1286 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 PRKCHP24723 683 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 CD27P26842 260 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 CYLC1P35663 651 aaPredicted RBP10.47□□□□□ -0.73
ATG4B-212ENST00000430617 DGKGP49619 791 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 YWHAEP62258 255 aaKnown RBP10.47□□□□□ -0.73
ATG4B-212ENST00000430617 TNNC1P63316 161 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 GABREP78334 506 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 TLE1Q04724 770 aa10.47□□□□□ -0.73
ATG4B-212ENST00000430617 IFRD2Q12894 506 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms