RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SFXN1Q9H9B4 322 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 PIDD1Q9HB75 910 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 PCDH9Q9HC56 1237 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 TMEM248Q9NWD8 314 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 PPARGC1AQ9UBK2 798 aaKnown RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 SLC12A6Q9UHW9 1150 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 UTP11Q9Y3A2 253 aaKnown RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 UNC80Q8N2C7 3258 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 RASA4BC9J798 803 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 KCNK1O00180 336 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 DNALI1O14645 258 aaPredicted RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 RASA4O43374 803 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 GAS8O95995 478 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 PTPN3P26045 913 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 HTR7P34969 479 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 CHKAP35790 457 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 ACVRL1P37023 503 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 SLC11A2P49281 568 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 PAPOLAP51003 745 aaKnown RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 ITGA8P53708 1063 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 TUBB4BP68371 445 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 PPIDQ08752 370 aaKnown RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 WASHC5Q12768 1159 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 GPS1Q13098 491 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 XRCC4Q13426 336 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 HLTFQ14527 1009 aaKnown RBP eCLIP9.11□□□□□ -0.954e-6■□□□□ 10
SMC6-204ENST00000428868 ZNF77Q15935 545 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 P3H1Q32P28 736 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 BEND6Q5SZJ8 279 aaPredicted RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 ANKRD54Q6NXT1 300 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 RHBDF2Q6PJF5 856 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 LRRC31Q6UY01 552 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 GET4Q7L5D6 327 aaPredicted RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 FAM217AQ8IXS0 508 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 IFT20Q8IY31 132 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 EFHBQ8N7U6 833 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 ZSCAN18Q8TBC5 510 aaPredicted RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 FBXO25Q8TCJ0 367 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 USP33Q8TEY7 942 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 TFB1MQ8WVM0 346 aaKnown RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 ART4Q93070 314 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 BHMTQ93088 406 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 AZIN2Q96A70 460 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 RTP4Q96DX8 246 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 FAM161BQ96MY7 647 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 CDCA3Q99618 268 aaPredicted RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 GORASP1Q9BQQ3 440 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 PRDM6Q9NQX0 595 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 ZNF446Q9NWS9 450 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 SEPT10Q9P0V9 454 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 CLEC1BQ9P126 229 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 STOML2Q9UJZ1 356 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 CLEC4EQ9ULY5 219 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 ARHGAP26Q9UNA1 814 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 MRPS23Q9Y3D9 190 aaKnown RBP9.11□□□□□ -0.95
SMC6-204ENST00000428868 ACTL7AQ9Y615 435 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 MTCH2Q9Y6C9 303 aa9.11□□□□□ -0.95
SMC6-204ENST00000428868 LRRK1Q38SD2 2015 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 CLUHO75153 1309 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 A0A0D9SEW6 157 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 CCDC151A5D8V7 595 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 HACD1B0YJ81 288 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 J3KR12 359 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 RNF103O00237 685 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 TBL1XO60907 577 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 TMEM63AO94886 807 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 METTL18O95568 372 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 GLDCP23378 1020 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 DDX6P26196 483 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMC6-204ENST00000428868 SERPINB6P35237 376 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 LTBRP36941 435 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 AVPR1AP37288 418 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 ADCY8P40145 1251 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 VIPR2P41587 438 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 PLTPP55058 493 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 ADAM15Q13444 863 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 BRD3Q15059 726 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 PDK1Q15118 436 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 ARHGAP15Q53QZ3 475 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 FSCBQ5H9T9 825 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 RNASEH2BQ5TBB1 312 aaKnown RBP9.1□□□□□ -0.95
SMC6-204ENST00000428868 HEATR6Q6AI08 1181 aaKnown RBP9.1□□□□□ -0.95
SMC6-204ENST00000428868 TMEM184AQ6ZMB5 413 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 LEKR1Q6ZMV7 388 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 SYDE1Q6ZW31 735 aaPredicted RBP9.1□□□□□ -0.95
SMC6-204ENST00000428868 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 GPR149Q86SP6 731 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 ZNF567Q8N184 647 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 UMODL1-AS1Q8N2C9 162 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 CCDC89Q8N998 374 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 TSEN2Q8NCE0 465 aaKnown RBP9.1□□□□□ -0.95
SMC6-204ENST00000428868 CCNYQ8ND76 341 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 OR7D4Q8NG98 312 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 HTR3CQ8WXA8 447 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 CPT1BQ92523 772 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 RUBCNQ92622 972 aa9.1□□□□□ -0.95
SMC6-204ENST00000428868 HDAC11Q96DB2 347 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms