RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 MOCS3O95396 460 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 KLF8O95600 359 aaPredicted RBP22.93■■□□□ 1.26
PTPN18-205ENST00000428843 KRT7P08729 469 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 GOT1P17174 413 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 POLR2EP19388 210 aaKnown RBP22.93■■□□□ 1.26
PTPN18-205ENST00000428843 NUMBP49757 651 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 PLK1P53350 603 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 DMC1Q14565 340 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 PLEKHG6Q3KR16 790 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 C6orf118Q5T5N4 469 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 C11orf63Q6NUN7 778 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 CCDC33Q8N5R6 958 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 ALLCQ8N6M5 410 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 IL17RCQ8NAC3 791 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 TTC17Q96AE7 1141 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 ALG14Q96F25 216 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 CALR3Q96L12 384 aaKnown RBP22.93■■□□□ 1.26
PTPN18-205ENST00000428843 CATSPERBQ9H7T0 1116 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 PCDH18Q9HCL0 1135 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 NDFIP2Q9NV92 336 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 C2orf42Q9NWW7 574 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 CWC15Q9P013 229 aaKnown RBP22.93■■□□□ 1.26
PTPN18-205ENST00000428843 DNAI1Q9UI46 699 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 OR51B4Q9Y5P0 310 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 ALG6Q9Y672 507 aa22.93■■□□□ 1.26
PTPN18-205ENST00000428843 WASH4PA8MWX3 477 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 SPOPO43791 374 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 ATG13O75143 517 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 HNRNPLP14866 589 aaKnown RBP eCLIP22.92■■□□□ 1.26
PTPN18-205ENST00000428843 MAPKAPK2P49137 400 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 ZNF135P52742 658 aaPredicted RBP22.92■■□□□ 1.26
PTPN18-205ENST00000428843 HSF5Q4G112 596 aaPredicted RBP22.92■■□□□ 1.26
PTPN18-205ENST00000428843 RFX8Q6ZV50 586 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 DAAM2Q86T65 1068 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 RTL3Q8N8U3 475 aaKnown RBP22.92■■□□□ 1.26
PTPN18-205ENST00000428843 CYB5D2Q8WUJ1 264 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 ZNF830Q96NB3 372 aaPredicted RBP22.92■■□□□ 1.26
PTPN18-205ENST00000428843 ACOX2Q99424 681 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 FEM1AQ9BSK4 669 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 MUC3BQ9H195 1237 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 KCNF1Q9H3M0 494 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 KLHL11Q9NVR0 708 aa22.92■■□□□ 1.26
PTPN18-205ENST00000428843 POLR3BQ9NW08 1133 aaPredicted RBP22.92■■□□□ 1.26
PTPN18-205ENST00000428843 THAP10Q9P2Z0 257 aaPredicted RBP22.92■■□□□ 1.26
PTPN18-205ENST00000428843 MUC22E2RYF6 1773 aaPredicted RBP22.91■■□□□ 1.26
PTPN18-205ENST00000428843 CHD5Q8TDI0 1954 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 ILVBLA1L0T0 632 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 MACROD2A1Z1Q3 448 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 H3BRJ5 948 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 FGF10O15520 208 aaPredicted RBP22.91■■□□□ 1.26
PTPN18-205ENST00000428843 DAPK3O43293 454 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 ATP5BP06576 529 aaKnown RBP22.91■■□□□ 1.26
PTPN18-205ENST00000428843 CCDC175P0C221 793 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 ARL4AP40617 200 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 HCAR3P49019 387 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 ARSEP51690 589 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 CDH6P55285 790 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 KRT81Q14533 505 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 TRMT11Q7Z4G4 463 aaKnown RBP22.91■■□□□ 1.26
PTPN18-205ENST00000428843 POLNQ7Z5Q5 900 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 TXNDC5Q8NBS9 432 aaKnown RBP22.91■■□□□ 1.26
PTPN18-205ENST00000428843 FAM71BQ8TC56 605 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 ACDQ96AP0 544 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 PPP1R9BQ96SB3 815 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 ZNF318Q5VUA4 2279 aa22.91■■□□□ 1.26
PTPN18-205ENST00000428843 A0A0D9SEW6 157 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 CD48P09326 243 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 DLDP09622 509 aaKnown RBP22.9■■□□□ 1.26
PTPN18-205ENST00000428843 TNNT1P13805 278 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 ERCC2P18074 760 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 WASP42768 502 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 CTSOP43234 321 aaPredicted RBP22.9■■□□□ 1.26
PTPN18-205ENST00000428843 SATB1Q01826 763 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 GNA12Q03113 381 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 DPYSQ14117 519 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 ZNF234Q14588 700 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 LRRC38Q5VT99 294 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 ZNF783Q6ZMS7 281 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 MAMSTRQ6ZN01 415 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 C1orf210Q8IVY1 113 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 RHOT1Q8IXI2 618 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 CHPFQ8IZ52 775 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 KCTD6Q8NC69 237 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 OR7D4Q8NG98 312 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 TSC1Q92574 1164 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 PSMB7Q99436 277 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 TSGA10Q9BZW7 698 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 CACNA2D2Q9NY47 1150 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 VPS28Q9UK41 221 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 MMP17Q9ULZ9 603 aa22.9■■□□□ 1.26
PTPN18-205ENST00000428843 GRID2IPA4D2P6 1211 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 SGK1O00141 431 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 ADAM23O75077 832 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 ASLP04424 464 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 NTSR1P30989 418 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 CXCL12P48061 93 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 CCR3P51677 355 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 CCDC173Q0VFZ6 552 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 E2F5Q15329 346 aa22.89■■□□□ 1.25
PTPN18-205ENST00000428843 IFI16Q16666 785 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms