RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 EGFLAMQ63HQ2 1017 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 RFX8Q6ZV50 586 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 POLNQ7Z5Q5 900 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 ZNF513Q8N8E2 541 aaPredicted RBP25.15■■□□□ 1.62
VEGFA-209ENST00000425836 SORCS1Q8WY21 1168 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 TTC17Q96AE7 1141 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 FEM1AQ9BSK4 669 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 CATSPERBQ9H7T0 1116 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 PCDH18Q9HCL0 1135 aa25.15■■□□□ 1.62
VEGFA-209ENST00000425836 KIAA1549LQ6ZVL6 1849 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 WASH4PA8MWX3 477 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 CHURC1-FNTBB4DL54 471 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 SPOPO43791 374 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 HCAR3P49019 387 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 MAPKAPK2P49137 400 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 ARSEP51690 589 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 PLK1P53350 603 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 CCDC173Q0VFZ6 552 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 LRRC38Q5VT99 294 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 RNF219Q5W0B1 726 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-209ENST00000425836 DAAM2Q86T65 1068 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 SPEM1Q8N4L4 309 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 RTL3Q8N8U3 475 aaKnown RBP25.14■■□□□ 1.62
VEGFA-209ENST00000425836 IL17RCQ8NAC3 791 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 DTWD2Q8NBA8 298 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 FAM71BQ8TC56 605 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 UCMAQ8WVF2 138 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 PPP1R9BQ96SB3 815 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 IER2Q9BTL4 223 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 DNAI1Q9UI46 699 aa25.14■■□□□ 1.62
VEGFA-209ENST00000425836 FGF10O15520 208 aaPredicted RBP25.14■■□□□ 1.61
VEGFA-209ENST00000425836 MOCS3O95396 460 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 HNRNPLP14866 589 aaKnown RBP eCLIP25.14■■□□□ 1.61
VEGFA-209ENST00000425836 POLR2EP19388 210 aaKnown RBP25.14■■□□□ 1.61
VEGFA-209ENST00000425836 NUMBP49757 651 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 CDH6P55285 790 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 ALLCQ8N6M5 410 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 ACOX2Q99424 681 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 TSGA10Q9BZW7 698 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 KLHL11Q9NVR0 708 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 C2orf42Q9NWW7 574 aa25.14■■□□□ 1.61
VEGFA-209ENST00000425836 A0A0D9SEW6 157 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 ILVBLA1L0T0 632 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 H3BRJ5 948 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 DAPK3O43293 454 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 ATG13O75143 517 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 DPYSQ14117 519 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 KRT81Q14533 505 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 IFI16Q16666 785 aaKnown RBP25.13■■□□□ 1.61
VEGFA-209ENST00000425836 ZNF783Q6ZMS7 281 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 MAMSTRQ6ZN01 415 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 RHOT1Q8IXI2 618 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 CCDC33Q8N5R6 958 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 LRRC57Q8N9N7 239 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 KCTD6Q8NC69 237 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 CYB5D2Q8WUJ1 264 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 TSC1Q92574 1164 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 MUC3BQ9H195 1237 aa25.13■■□□□ 1.61
VEGFA-209ENST00000425836 THAP10Q9P2Z0 257 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-209ENST00000425836 GRID2IPA4D2P6 1211 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 KLF8O95600 359 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-209ENST00000425836 ATP5BP06576 529 aaKnown RBP25.12■■□□□ 1.61
VEGFA-209ENST00000425836 CD48P09326 243 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 TNNT1P13805 278 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 IL4RP24394 825 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 ARL4AP40617 200 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 HSF5Q4G112 596 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-209ENST00000425836 ZNF662Q6ZS27 426 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 TXNDC5Q8NBS9 432 aaKnown RBP25.12■■□□□ 1.61
VEGFA-209ENST00000425836 CSPG4P5Q96PW8 444 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 POLR3BQ9NW08 1133 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-209ENST00000425836 SPATA6Q9NWH7 488 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-209ENST00000425836 VPS28Q9UK41 221 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 PPP2R2CQ9Y2T4 447 aa25.12■■□□□ 1.61
VEGFA-209ENST00000425836 KRT86O43790 486 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 DLDP09622 509 aaKnown RBP25.11■■□□□ 1.61
VEGFA-209ENST00000425836 ERCC2P18074 760 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 GNA12Q03113 381 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 PDK2Q15119 407 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 PTPRNQ16849 979 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 ZFYVE27Q5T4F4 411 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 RNF10Q8N5U6 811 aaKnown RBP25.11■■□□□ 1.61
VEGFA-209ENST00000425836 OR7D4Q8NG98 312 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 KIAA1524Q8TCG1 905 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 RAPGEF5Q92565 580 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 PSMB7Q99436 277 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 GUCA1BQ9UMX6 200 aa25.11■■□□□ 1.61
VEGFA-209ENST00000425836 MIA3Q5JRA6 1907 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 SGK1O00141 431 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 ADAM23O75077 832 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 CTSOP43234 321 aaPredicted RBP25.1■■□□□ 1.61
VEGFA-209ENST00000425836 MMRN1Q13201 1228 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 DPYSL3Q14195 570 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 ZNF234Q14588 700 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 TRMT11Q7Z4G4 463 aaKnown RBP25.1■■□□□ 1.61
VEGFA-209ENST00000425836 CHPFQ8IZ52 775 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 ACDQ96AP0 544 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 NOL6Q9H6R4 1146 aaKnown RBP25.1■■□□□ 1.61
VEGFA-209ENST00000425836 CACNA2D2Q9NY47 1150 aa25.1■■□□□ 1.61
VEGFA-209ENST00000425836 RCOR3Q9P2K3 495 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms