RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SMOC1Q9H4F8 434 aa18.43■□□□□ 0.54
IGHV3-47-201ENST00000425060 FBRSQ9HAH7 460 aa18.43■□□□□ 0.54
IGHV3-47-201ENST00000425060 VPS45Q9NRW7 570 aa18.43■□□□□ 0.54
IGHV3-47-201ENST00000425060 WSB2Q9NYS7 404 aaPredicted RBP18.43■□□□□ 0.54
IGHV3-47-201ENST00000425060 ZNF212Q9UDV6 495 aa18.43■□□□□ 0.54
IGHV3-47-201ENST00000425060 TNRC6BQ9UPQ9 1833 aaKnown RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 E9PAM4 449 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 DDX3XO00571 662 aaKnown RBP eCLIP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 AP5Z1O43299 807 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 SKILP12757 684 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 GPD1P21695 349 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 CD6P30203 668 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 ID4P47928 161 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 ST8SIA6P61647 398 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 RPL7AP62424 266 aaKnown RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 NRG1Q02297 640 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 RPL6Q02878 288 aaKnown RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 ZNF177Q13360 481 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 RSPO4Q2I0M5 234 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 C9orf64Q5T6V5 341 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 PEAR1Q5VY43 1037 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 HGSNATQ68CP4 663 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 PPP1R2P3Q6NXS1 205 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 LRRC31Q6UY01 552 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 SLC41A1Q8IVJ1 513 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 ZNF419Q96HQ0 510 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 MAGEB5Q9BZ81 275 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 RXFP3Q9NSD7 469 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 TMEM74BQ9NUR3 256 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 MPP6Q9NZW5 540 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 IFNKQ9P0W0 207 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 DCHS1Q96JQ0 3298 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 GON4LQ3T8J9 2241 aa18.42■□□□□ 0.54
IGHV3-47-201ENST00000425060 TARSL2A2RTX5 802 aaKnown RBP18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 TTC34A8MYJ7 566 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 GDF9O60383 454 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 ZNF143P52747 638 aaPredicted RBP18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 RPS14P62263 151 aaKnown RBP18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 SULT2A1Q06520 285 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 KLHL30Q0D2K2 578 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 NFKBIBQ15653 356 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 MANEALQ5VSG8 457 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 PLEKHA7Q6IQ23 1121 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 DNAJC24Q6P3W2 148 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 LRSAM1Q6UWE0 723 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 CYP2U1Q7Z449 544 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 FAM172AQ8WUF8 416 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 SYN2Q92777 582 aaPredicted RBP18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 PTPRN2Q92932 1015 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 RPL10LQ96L21 214 aaKnown RBP18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 PPP1R9BQ96SB3 815 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 OSBPL2Q9H1P3 480 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 RSPH9Q9H1X1 276 aaPredicted RBP18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 PPARGC1AQ9UBK2 798 aaKnown RBP18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 CAPN11Q9UMQ6 739 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 CEP192Q8TEP8 1941 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 DOCK4Q8N1I0 1966 aa18.41■□□□□ 0.54
IGHV3-47-201ENST00000425060 TMCO5BA8MYB1 307 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 CCP110O43303 1012 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 SRGAP2O75044 1071 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 SIN3BO75182 1162 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 NUMBP49757 651 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 STK19P49842 368 aaPredicted RBP18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 OGDHQ02218 1023 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 ZBTB16Q05516 673 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 ZNF33AQ06730 810 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 MAMLD1Q13495 774 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 ARL13BQ3SXY8 428 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 RNF219Q5W0B1 726 aaPredicted RBP18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 LYSMD4Q5XG99 296 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 TCEAL6Q6IPX3 200 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 ARMCX6Q7L4S7 300 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 SETD3Q86TU7 594 aaPredicted RBP18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 DNAAF5Q86Y56 855 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 SYT12Q8IV01 421 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 DEFB119Q8N690 84 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 CCDC185Q8N715 623 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 PIGKQ92643 395 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 TCEAL3Q969E4 200 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 NTAN1Q96AB6 310 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 IQCDQ96DY2 449 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 TOE1Q96GM8 510 aaKnown RBP18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 MCEEQ96PE7 176 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 PSMB7Q99436 277 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 XPO4Q9C0E2 1151 aaKnown RBP18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 OR12D3Q9UGF7 316 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 PILRBQ9UKJ0 227 aa18.4■□□□□ 0.54
IGHV3-47-201ENST00000425060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 PATE3B3GLJ2 98 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 FAM72CH0Y354 149 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 GYPCP04921 128 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 ACADMP11310 421 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 ITPKAP23677 461 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 OXTRP30559 389 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 ZBED6P86452 979 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 SCAPQ12770 1279 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 FAM72AQ5TYM5 149 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 FAM72DQ6L9T8 149 aa18.39■□□□□ 0.53
IGHV3-47-201ENST00000425060 FAM72BQ86X60 149 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms