RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ITGB3P05106 788 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 SP2Q02086 613 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 PITRM1Q5JRX3 1037 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 C1QTNF12Q5T7M4 302 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 SEL1L3Q68CR1 1132 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 ZNF669Q96BR6 464 aaPredicted RBP16.99■□□□□ 0.31
PKP4-204ENST00000421462 ANKRD36BP1Q96IX9 119 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 FRMD8Q9BZ67 464 aaPredicted RBP16.99■□□□□ 0.31
PKP4-204ENST00000421462 XYLT2Q9H1B5 865 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 AP4S1Q9Y587 144 aa16.99■□□□□ 0.31
PKP4-204ENST00000421462 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 C2CD4BA6NLJ0 364 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 KCNU1A8MYU2 1149 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 EPHX2P34913 555 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 CCDC14Q49A88 953 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 ZFP1Q6P2D0 407 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 FAM110BQ8TC76 370 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 APBB2Q92870 758 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 TASP1Q9H6P5 420 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 PLK2Q9NYY3 685 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 PRPF19Q9UMS4 504 aaKnown RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 ADGRA2Q96PE1 1338 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 INO80B-WBP1J3KQ70 363 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 PAPSS1O43252 624 aaPredicted RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 FAM189A1O60320 539 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 TRIM13O60858 407 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 TIPRLO75663 272 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 ZNF23P17027 643 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 SDC4P31431 198 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 ABCD1P33897 745 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 CDK9P50750 372 aaKnown RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 RPL26P61254 145 aaKnown RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 PDAP1Q13442 181 aaKnown RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 ARL13AQ5H913 290 aaPredicted RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 TIFABQ6ZNK6 161 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 EEPD1Q7L9B9 569 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 GPR141Q7Z602 305 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 CDKL3Q8IVW4 592 aaPredicted RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 PYROXD2Q8N2H3 581 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 INO80BQ9C086 356 aaPredicted RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 GMPR2Q9P2T1 348 aaKnown RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 PHGDHO43175 533 aaKnown RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 B4GALT5O43286 388 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 GNAO1P09471 354 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 COL6A2P12110 1019 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 ZNF26P17031 533 aaPredicted RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 TMEM102Q8N9M5 508 aaPredicted RBP16.98■□□□□ 0.31
PKP4-204ENST00000421462 MCUQ8NE86 351 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 OSBPL6Q9BZF3 934 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 EFCAB1Q9HAE3 211 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 PLGRKTQ9HBL7 147 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 SLC38A10Q9HBR0 1119 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 INIPQ9NRY2 104 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 FAIMQ9NVQ4 179 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 SFMBT1Q9UHJ3 866 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 BCAP29Q9UHQ4 241 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 ZDHHC2Q9UIJ5 367 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 SLC39A10Q9ULF5 831 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 BTAF1O14981 1849 aa16.98■□□□□ 0.31
PKP4-204ENST00000421462 BCLAF3A2AJT9 711 aaKnown RBP16.97■□□□□ 0.31
PKP4-204ENST00000421462 FAM149AA5PLN7 773 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 J3QRK9 145 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 CNTFP26441 200 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 GPD2P43304 727 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 TICAM1Q8IUC6 712 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 BBS5Q8N3I7 341 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 FBXL8Q96CD0 374 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 MCRS1Q96EZ8 462 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 OMDQ99983 421 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 PSMD12O00232 456 aaPredicted RBP16.97■□□□□ 0.31
PKP4-204ENST00000421462 AKAP10O43572 662 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 OATP04181 439 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 PSMB4P28070 264 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 GARSP41250 739 aaKnown RBP16.97■□□□□ 0.31
PKP4-204ENST00000421462 GRIA4P48058 902 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 RXRGP48443 463 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 IKBKEQ14164 716 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 GPR107Q5VW38 600 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 FSTL4Q6MZW2 842 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 C16orf87Q6PH81 154 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 ABHD15Q6UXT9 468 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 ZBTB49Q6ZSB9 765 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 CHST15Q7LFX5 561 aaPredicted RBP16.97■□□□□ 0.31
PKP4-204ENST00000421462 DNAAF3Q8N9W5 541 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 C12orf43Q96C57 262 aaKnown RBP16.97■□□□□ 0.31
PKP4-204ENST00000421462 LHX5Q9H2C1 402 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 NMRAL1Q9HBL8 299 aa16.97■□□□□ 0.31
PKP4-204ENST00000421462 PRSS51A0A1B0GVH4 220 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 NFICP08651 508 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 UGT1A6P19224 532 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 TFEBP19484 476 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 TGM2P21980 687 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 GLDCP23378 1020 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 ESRRGP62508 458 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 ITGA7Q13683 1181 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
PKP4-204ENST00000421462 CHERPQ8IWX8 916 aaKnown RBP16.96■□□□□ 0.31
PKP4-204ENST00000421462 ACMSDQ8TDX5 336 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 TMEM176AQ96HP8 235 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 MAML3Q96JK9 1138 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms