RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 STK40Q8N2I9 435 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 OR2T34Q8NGX1 318 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 PTPRN2Q92932 1015 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 RNF34Q969K3 372 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 SKA1Q96BD8 255 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 SLC6A18Q96N87 628 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 CPXM1Q96SM3 734 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 FAM129BQ96TA1 746 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 PRMT1Q99873 361 aaKnown RBP17.84■□□□□ 0.45
PTCD1-202ENST00000419981 ASNSD1Q9NWL6 643 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 DDIT4Q9NX09 232 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 COX16Q9P0S2 106 aa17.84■□□□□ 0.45
PTCD1-202ENST00000419981 PKD1L2Q7Z442 2459 aa17.83■□□□□ 0.45
PTCD1-202ENST00000419981 CHD5Q8TDI0 1954 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 TAF4O00268 1085 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 VILLO15195 856 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 TNFSF14O43557 240 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 HSF2BPO75031 334 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 PDGFRAP16234 1089 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 C5AR1P21730 350 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 CCR1P32246 355 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 NUMBP49757 651 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 IL9RQ01113 521 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 SULT2A1Q06520 285 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 ELAVL3Q14576 367 aaKnown RBP17.83■□□□□ 0.44
PTCD1-202ENST00000419981 EXOC3L4Q17RC7 722 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 EFHC1Q5JVL4 640 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 PASD1Q8IV76 773 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 DEFB106AQ8N104 65 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 AADATQ8N5Z0 425 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 SHC3Q92529 594 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 PPP1R13BQ96KQ4 1090 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 NOX5Q96PH1 765 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 SLC2A13Q96QE2 648 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 KIAA1468Q9P260 1216 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 PCDHGC3Q9UN70 934 aa17.83■□□□□ 0.44
PTCD1-202ENST00000419981 TRPM6Q9BX84 2022 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 GTPBP10A4D1E9 387 aaKnown RBP17.82■□□□□ 0.44
PTCD1-202ENST00000419981 GRAP2O75791 330 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 DKK1O94907 266 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 IL1BP01584 269 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 GOT1P17174 413 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 MZF1P28698 734 aaPredicted RBP17.82■□□□□ 0.44
PTCD1-202ENST00000419981 CCR5P51681 352 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 ADPRHP54922 357 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 OXCT1P55809 520 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 APBA1Q02410 837 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 FAM183BPQ6ZVS7 135 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 TMPRSS7Q7RTY8 843 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 OR14C36Q8NHC7 312 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 CCDC86Q9H6F5 360 aaKnown RBP17.82■□□□□ 0.44
PTCD1-202ENST00000419981 EBF2Q9HAK2 575 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 AASDHPPTQ9NRN7 309 aa17.82■□□□□ 0.44
PTCD1-202ENST00000419981 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
PTCD1-202ENST00000419981 ARID1BQ8NFD5 2236 aaPredicted RBP17.82■□□□□ 0.44
PTCD1-202ENST00000419981 ANKRD11Q6UB99 2663 aaPredicted RBP17.81■□□□□ 0.44
PTCD1-202ENST00000419981 ACACAQ13085 2346 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 A0A1B0GTQ1 180 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 PON1P27169 355 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 CD38P28907 300 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 MTIF2P46199 727 aaKnown RBP17.81■□□□□ 0.44
PTCD1-202ENST00000419981 PLK1P53350 603 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 SNX16P57768 344 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 CENPCQ03188 943 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 PTK2Q05397 1052 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 MTA1Q13330 715 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 KCNJ12Q14500 433 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 CAMK4Q16566 473 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 OR6B2Q6IFH4 312 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 CXorf57Q6NSI4 855 aaKnown RBP17.81■□□□□ 0.44
PTCD1-202ENST00000419981 FBXL22Q6P050 247 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 C11orf57Q6ZUT1 292 aaPredicted RBP17.81■□□□□ 0.44
PTCD1-202ENST00000419981 GALNT15Q8N3T1 639 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 WDTC1Q8N5D0 677 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 C1orf131Q8NDD1 294 aaKnown RBP17.81■□□□□ 0.44
PTCD1-202ENST00000419981 RPRD1AQ96P16 312 aaPredicted RBP17.81■□□□□ 0.44
PTCD1-202ENST00000419981 SPAG5Q96R06 1193 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 PPP1R9BQ96SB3 815 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 FTSJ1Q9UET6 329 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 SLC25A13Q9UJS0 675 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 LHX6Q9UPM6 363 aa17.81■□□□□ 0.44
PTCD1-202ENST00000419981 DAB1O75553 588 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 WNT1P04628 370 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 VAV1P15498 845 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 NME3Q13232 169 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 SLC45A4Q5BKX6 768 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 SMYD5Q6GMV2 418 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 OLFML1Q6UWY5 402 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 DSG4Q86SJ6 1040 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 OR8D1Q8WZ84 308 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 ELF4Q99607 663 aaPredicted RBP17.8■□□□□ 0.44
PTCD1-202ENST00000419981 VANGL2Q9ULK5 521 aa17.8■□□□□ 0.44
PTCD1-202ENST00000419981 FREM2Q5SZK8 3169 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 DSPP15924 2871 aaKnown RBP17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3DA0A087WVF3 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3IA0A087WXS9 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3EA0A087X179 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3KA0A087X1G2 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3FA6NER0 549 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms