RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 SERPINB10P48595 397 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 XRCC4Q13426 336 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SCARA3Q6AZY7 606 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 DOK6Q6PKX4 331 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 ZNF655Q8N720 491 aaPredicted RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 LRRC52Q8N7C0 313 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 HAS1Q92839 578 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SHCBP1LQ9BZQ2 653 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 MPP6Q9NZW5 540 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 OR12D3Q9UGF7 316 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 GGT7Q9UJ14 662 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 CES2O00748 559 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SNHG28P0DPA3 235 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 RRM2P31350 389 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 GP5P40197 560 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 PIK3CGP48736 1102 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 TRPC1P48995 793 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 PRKAA2P54646 552 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 FPGSQ05932 587 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 FAM46CQ5VWP2 391 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 KCNK18Q7Z418 384 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 ZNF614Q8N883 585 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 ANKRD52Q8NB46 1076 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 DUSP9Q99956 384 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 SCN3BQ9NY72 215 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 HES2Q9Y543 173 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 DUSP10Q9Y6W6 482 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 CASZ1Q86V15 1759 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 MYH3P11055 1940 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SIGLEC16A6NMB1 481 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SNTNA6NMZ2 147 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 APOC4-APOC2K7ER74 178 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 PDE2AO00408 941 aaPredicted RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 TM9SF1O15321 606 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 APOC2P02655 101 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 CLTBP09497 229 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SLURP2P0DP57 97 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 TCN1P20061 433 aaPredicted RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 IRF5Q13568 498 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 CBWD6Q4V339 395 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 HLA-DQA1Q5Y7H0 255 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 WDR59Q6PJI9 974 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 C17orf99Q6UX52 265 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 KIAA1324Q6UXG2 1013 aaKnown RBP8.61□□□□□ -1.03
UBR4-206ENST00000419533 CHMP1BQ7LBR1 199 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 TRPM8Q7Z2W7 1104 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 TMCO5AQ8N6Q1 288 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 CEP70Q8NHQ1 597 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 SEC16BQ96JE7 1060 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 ACOX2Q99424 681 aa8.61□□□□□ -1.03
UBR4-206ENST00000419533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.61□□□□□ -1.03
UBR4-206ENST00000419533 ERI2A8K979 691 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 GSNP06396 782 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 TPH1P17752 444 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 LSP1P33241 339 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 GLUD2P49448 558 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 CYLC2Q14093 348 aaPredicted RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 CYP2A13Q16696 494 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 CCDC153Q494R4 210 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 RAP1GAP2Q684P5 730 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 SERPINA13PQ6UXR4 307 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 CENPLQ8N0S6 344 aaPredicted RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 IL31RAQ8NI17 732 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 BTN2A2Q8WVV5 523 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 MAGEB18Q96M61 343 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 TTPALQ9BTX7 342 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 FUCA2Q9BTY2 467 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ZYG11BQ9C0D3 744 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 CDC42EP4Q9H3Q1 356 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 ZNF831Q5JPB2 1677 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 LOC100653049A0A140TA62 436 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 DNALI1O14645 258 aaPredicted RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 ZBTB14O43829 449 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 TBL1XO60907 577 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 KRT34O76011 436 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 CPSF4O95639 269 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 ERBB2P04626 1255 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ITGB6P18564 788 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 PSMA4P25789 261 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 SERPINH1P50454 418 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 TUSC3Q13454 348 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 PEX6Q13608 980 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 RRP1BQ14684 758 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 PARP6Q2NL67 630 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ZC3H12AQ5D1E8 599 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 C16orf87Q6PH81 154 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 KCNT2Q6UVM3 1135 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 SLC9A9Q8IVB4 645 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 FBXO22Q8NEZ5 403 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 EPS8L3Q8TE67 593 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 CYGBQ8WWM9 190 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 CEP41Q9BYV8 373 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 MCOLN1Q9GZU1 580 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 EFCAB1Q9HAE3 211 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 TMCC3Q9ULS5 477 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 KANSL1LA0AUZ9 987 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 WDR27A2RRH5 827 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ZSCAN5CA6NGD5 496 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms